Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3861

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
4,289,025	-		Pf1N1B4_3860	0.50	-1.2
4,289,334	+		Pf1N1B4_3860	0.69	-2.4
4,289,335	-		Pf1N1B4_3860	0.69	-0.2
4,289,394	-		Pf1N1B4_3860	0.72	+0.2
4,289,394	-		Pf1N1B4_3860	0.72	+0.4
4,289,560	+		Pf1N1B4_3860	0.82	-0.0
4,289,560	+		Pf1N1B4_3860	0.82	-2.8
4,289,573	+		Pf1N1B4_3860	0.83	+0.4
4,289,574	-		Pf1N1B4_3860	0.83	+0.2
4,289,574	-		Pf1N1B4_3860	0.83	+1.0
4,289,574	-		Pf1N1B4_3860	0.83	+0.1
4,289,574	-		Pf1N1B4_3860	0.83	-1.3
4,289,574	-		Pf1N1B4_3860	0.83	-0.5
4,289,577	+		Pf1N1B4_3860	0.83	-0.1
4,289,598	+		Pf1N1B4_3860	0.84	+0.8
4,289,598	+		Pf1N1B4_3860	0.84	+0.7
4,289,599	-		Pf1N1B4_3860	0.84	-1.2
4,289,599	-		Pf1N1B4_3860	0.84	+0.4
4,289,764	+				+0.9
4,289,764	+				-0.6
4,289,909	+				+0.4
4,289,920	+				+2.1
4,290,018	-				-0.6
4,290,111	+		Pf1N1B4_3861	0.16	+1.1
4,290,111	+		Pf1N1B4_3861	0.16	+0.9
4,290,112	-		Pf1N1B4_3861	0.16	+1.4
4,290,112	-		Pf1N1B4_3861	0.16	+1.2
4,290,112	-		Pf1N1B4_3861	0.16	+1.1
4,290,112	-				-0.6
4,290,113	+		Pf1N1B4_3861	0.16	-2.8
4,290,114	-				-1.2
4,290,114	-				+3.4
4,290,114	-		Pf1N1B4_3861	0.16	+1.9
4,290,114	-		Pf1N1B4_3861	0.16	-0.1
4,290,114	-		Pf1N1B4_3861	0.16	+0.4
4,290,145	+		Pf1N1B4_3861	0.20	-0.2
4,290,218	+		Pf1N1B4_3861	0.30	+0.6
4,290,218	+		Pf1N1B4_3861	0.30	+1.4
4,290,321	-		Pf1N1B4_3861	0.44	-0.1
4,290,324	+		Pf1N1B4_3861	0.44	-0.1
4,290,324	+				+0.4
4,290,325	-				-1.0
4,290,325	-				-0.6
4,290,325	-		Pf1N1B4_3861	0.44	+1.1
4,290,325	-		Pf1N1B4_3861	0.44	+2.4
4,290,327	-				-0.4
4,290,327	-				-1.6
4,290,327	-		Pf1N1B4_3861	0.45	+0.7
4,290,443	+		Pf1N1B4_3861	0.60	-0.1
4,290,443	+		Pf1N1B4_3861	0.60	+0.0
4,290,771	+				+1.9