Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3725

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
4,131,345	+		Pf1N1B4_3724	0.57	-1.1
4,131,345	+		Pf1N1B4_3724	0.57	-0.5
4,131,345	+		Pf1N1B4_3724	0.57	-2.3
4,131,345	+		Pf1N1B4_3724	0.57	-1.1
4,131,350	-				-1.5
4,131,412	+		Pf1N1B4_3724	0.61	+0.2
4,131,412	+		Pf1N1B4_3724	0.61	-1.5
4,131,412	+		Pf1N1B4_3724	0.61	-1.7
4,131,412	+		Pf1N1B4_3724	0.61	-0.5
4,131,412	+		Pf1N1B4_3724	0.61	-1.5
4,131,412	+		Pf1N1B4_3724	0.61	-2.5
4,131,412	+		Pf1N1B4_3724	0.61	-2.3
4,131,412	+		Pf1N1B4_3724	0.61	+0.2
4,131,413	-				-0.5
4,131,413	-		Pf1N1B4_3724	0.62	-1.8
4,131,508	+		Pf1N1B4_3724	0.68	+0.9
4,131,508	+		Pf1N1B4_3724	0.68	-0.5
4,131,509	-		Pf1N1B4_3724	0.68	-0.9
4,131,682	-		Pf1N1B4_3724	0.80	-0.3
4,131,682	-		Pf1N1B4_3724	0.80	+0.8
4,131,748	+		Pf1N1B4_3724	0.84	+0.5
4,131,820	+		Pf1N1B4_3724	0.89	+2.3
4,131,821	-		Pf1N1B4_3724	0.89	-1.1
4,131,837	+				-0.5
4,131,838	-				-1.5
4,132,034	+				-0.9
4,132,035	-				+0.2
4,132,035	-				-0.3
4,132,035	-				-2.5
4,132,035	-				-0.7
4,132,123	+				-0.2
4,132,123	+				+0.5
4,132,123	+				-0.8
4,132,136	-				-1.5
4,132,549	-		Pf1N1B4_3725	0.20	+1.8
4,132,767	+		Pf1N1B4_3725	0.31	-0.5
4,132,767	+		Pf1N1B4_3725	0.31	-1.1
4,132,767	+		Pf1N1B4_3725	0.31	+2.1
4,132,767	+		Pf1N1B4_3725	0.31	-0.4
4,132,768	-		Pf1N1B4_3725	0.31	+1.5
4,132,768	-		Pf1N1B4_3725	0.31	+0.8
4,132,768	-		Pf1N1B4_3725	0.31	-0.8
4,132,950	+		Pf1N1B4_3725	0.39	+0.3
4,132,955	+		Pf1N1B4_3725	0.40	+0.2
4,132,963	-		Pf1N1B4_3725	0.40	+0.4
4,133,441	+		Pf1N1B4_3725	0.63	+0.5
4,133,581	+		Pf1N1B4_3725	0.69	+0.7
4,133,806	-		Pf1N1B4_3725	0.80	-1.1
4,133,888	-		Pf1N1B4_3725	0.84	-1.1
4,133,967	+		Pf1N1B4_3725	0.88	-1.1
4,133,967	+		Pf1N1B4_3725	0.88	-0.1
4,133,967	+		Pf1N1B4_3725	0.88	-1.7
4,133,967	+		Pf1N1B4_3725	0.88	+1.0
4,133,968	-		Pf1N1B4_3725	0.88	-0.7
4,134,232	+				+0.2
4,134,232	+				+1.2
4,134,232	+				+0.5
4,134,233	-				-1.8
4,134,233	-				+1.9
4,134,233	-				+0.5
4,134,233	-				-1.5
4,134,298	-				-3.7
4,134,491	-		Pf1N1B4_3726	0.18	+1.0
4,134,566	-		Pf1N1B4_3726	0.23	-0.4
4,134,732	+		Pf1N1B4_3726	0.36	+1.2
4,134,794	+		Pf1N1B4_3726	0.40	+0.0
4,134,794	+		Pf1N1B4_3726	0.40	-0.0
4,134,794	+		Pf1N1B4_3726	0.40	-0.5
4,134,795	-		Pf1N1B4_3726	0.40	+1.1
4,134,943	-		Pf1N1B4_3726	0.51	-0.1
4,134,943	-		Pf1N1B4_3726	0.51	+0.3
4,135,200	+		Pf1N1B4_3726	0.71	-0.3
4,135,200	+		Pf1N1B4_3726	0.71	+0.0
4,135,200	+		Pf1N1B4_3726	0.71	-0.1
4,135,201	-		Pf1N1B4_3726	0.71	-2.1