Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3251

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
3,640,294	+		Pf1N1B4_3250	0.12	+0.1
3,640,376	+		Pf1N1B4_3250	0.20	+1.9
3,640,376	+		Pf1N1B4_3250	0.20	+1.5
3,640,376	+		Pf1N1B4_3250	0.20	-0.6
3,640,376	+		Pf1N1B4_3250	0.20	-0.3
3,640,377	-		Pf1N1B4_3250	0.20	+0.7
3,640,377	-		Pf1N1B4_3250	0.20	-1.1
3,640,377	-		Pf1N1B4_3250	0.20	+1.2
3,640,484	+		Pf1N1B4_3250	0.30	-1.3
3,640,484	+		Pf1N1B4_3250	0.30	-0.9
3,640,484	+		Pf1N1B4_3250	0.30	+0.5
3,640,484	+		Pf1N1B4_3250	0.30	+0.4
3,640,485	-		Pf1N1B4_3250	0.30	+0.7
3,640,485	-		Pf1N1B4_3250	0.30	-0.0
3,640,485	-		Pf1N1B4_3250	0.30	-1.5
3,640,485	-		Pf1N1B4_3250	0.30	-2.2
3,640,485	-		Pf1N1B4_3250	0.30	-0.3
3,640,485	-		Pf1N1B4_3250	0.30	+0.1
3,640,485	-		Pf1N1B4_3250	0.30	-0.0
3,640,485	-		Pf1N1B4_3250	0.30	-0.5
3,640,485	-		Pf1N1B4_3250	0.30	+0.2
3,640,485	-		Pf1N1B4_3250	0.30	-0.9
3,640,637	+		Pf1N1B4_3250	0.44	+0.7
3,640,637	+		Pf1N1B4_3250	0.44	-0.5
3,640,637	+		Pf1N1B4_3250	0.44	+1.0
3,640,637	+		Pf1N1B4_3250	0.44	+1.0
3,640,637	+		Pf1N1B4_3250	0.44	-0.5
3,640,637	+		Pf1N1B4_3250	0.44	+0.2
3,640,638	-		Pf1N1B4_3250	0.44	-1.3
3,640,638	-		Pf1N1B4_3250	0.44	+0.1
3,640,638	-		Pf1N1B4_3250	0.44	-0.6
3,640,689	-		Pf1N1B4_3250	0.49	-0.9
3,640,892	+		Pf1N1B4_3250	0.69	+0.0
3,640,893	-		Pf1N1B4_3250	0.69	+0.1
3,641,090	-		Pf1N1B4_3250	0.88	+0.7
3,641,090	-		Pf1N1B4_3250	0.88	+1.2
3,641,090	-		Pf1N1B4_3250	0.88	+0.3
3,641,090	-		Pf1N1B4_3250	0.88	-0.7
3,641,090	-		Pf1N1B4_3250	0.88	-0.9
3,641,090	-		Pf1N1B4_3250	0.88	-0.1
3,641,090	-		Pf1N1B4_3250	0.88	+1.4
3,641,093	+		Pf1N1B4_3250	0.88	+2.5
3,641,093	+		Pf1N1B4_3250	0.88	+0.5
3,641,093	+		Pf1N1B4_3250	0.88	+1.8
3,641,094	-		Pf1N1B4_3250	0.88	+0.6
3,641,094	-		Pf1N1B4_3250	0.88	+0.7
3,641,094	-		Pf1N1B4_3250	0.88	-0.1
3,641,096	+		Pf1N1B4_3250	0.88	+0.1
3,641,097	-		Pf1N1B4_3250	0.88	-0.9
3,641,097	-		Pf1N1B4_3250	0.88	+0.2
3,641,211	+				-0.6
3,641,223	-				+1.0
3,641,223	-				+0.4
3,641,223	-				+1.3
3,641,225	+				+0.7
3,641,225	+				-0.0
3,641,226	-				-0.0
3,641,226	-				+1.3
3,641,226	-				-0.3
3,641,248	+				-0.9
3,641,248	+				+0.7
3,641,248	+				+0.1
3,641,248	+				-0.1
3,641,249	-				-0.8
3,641,249	-				-0.5
3,641,249	-				-0.4
3,641,252	-				+0.7
3,641,252	-				-1.1
3,641,290	+				+0.2
3,641,290	+				-0.3
3,641,291	-				+1.1
3,641,291	-				-0.3
3,641,291	-				-1.0
3,641,291	-				-2.1
3,641,291	-				-0.3
3,641,748	+		Pf1N1B4_3251	0.43	+0.7
3,641,748	+		Pf1N1B4_3251	0.43	-0.6
3,641,748	+		Pf1N1B4_3251	0.43	+2.3
3,641,748	+		Pf1N1B4_3251	0.43	+0.2
3,641,749	-		Pf1N1B4_3251	0.43	+0.1
3,641,749	-		Pf1N1B4_3251	0.43	-1.6
3,641,749	-		Pf1N1B4_3251	0.43	-1.9
3,641,749	-		Pf1N1B4_3251	0.43	-0.8
3,641,749	-		Pf1N1B4_3251	0.43	-0.3
3,641,749	-		Pf1N1B4_3251	0.43	-1.6
3,641,749	-		Pf1N1B4_3251	0.43	+1.0
3,641,749	-		Pf1N1B4_3251	0.43	-2.3
3,641,749	-		Pf1N1B4_3251	0.43	+0.7
3,641,749	-		Pf1N1B4_3251	0.43	+0.1
3,641,749	-		Pf1N1B4_3251	0.43	+0.4
3,641,749	-		Pf1N1B4_3251	0.43	-0.7
3,641,749	-		Pf1N1B4_3251	0.43	-0.9
3,641,749	-		Pf1N1B4_3251	0.43	-1.9
3,641,749	-		Pf1N1B4_3251	0.43	-0.8
3,641,749	-		Pf1N1B4_3251	0.43	-1.0
3,641,749	-		Pf1N1B4_3251	0.43	+1.3
3,641,749	-		Pf1N1B4_3251	0.43	-1.3
3,641,780	+		Pf1N1B4_3251	0.46	-0.1
3,642,138	+		Pf1N1B4_3251	0.77	-2.1
3,642,138	+		Pf1N1B4_3251	0.77	-1.1
3,642,138	+		Pf1N1B4_3251	0.77	-1.5
3,642,138	+		Pf1N1B4_3251	0.77	-2.1
3,642,139	-		Pf1N1B4_3251	0.77	-1.3
3,642,139	-		Pf1N1B4_3251	0.77	+0.1
3,642,139	-		Pf1N1B4_3251	0.77	-0.2
3,642,139	-		Pf1N1B4_3251	0.77	-1.6
3,642,195	-		Pf1N1B4_3251	0.82	+0.1
3,642,615	-		Pf1N1B4_3252	0.63	+0.7
3,642,615	-		Pf1N1B4_3252	0.63	-1.7
3,642,686	-		Pf1N1B4_3252	0.85	+0.4
3,642,707	-				-3.0
3,642,707	-				-1.3
3,642,709	+				+0.0
3,642,710	-				+1.1
3,642,760	+				-1.9
3,642,808	+				-0.3
3,642,851	-				-0.4
3,642,852	+				-0.9
3,642,876	-				+1.7
3,642,876	-				-2.1
3,642,876	-				-0.0
3,642,876	-				+1.1
3,642,876	-				-0.4
3,642,893	+				+0.5
3,642,893	+				+0.2
3,642,893	+				-0.6
3,642,893	+				-0.3
3,642,893	+				+1.1
3,642,893	+				-0.3
3,642,893	+				-0.7
3,642,893	+				-0.3
3,642,894	-				-0.4
3,642,894	-				+2.5
3,642,894	-				-1.0
3,642,894	-				+0.1
3,642,894	-				-0.1
3,642,894	-				+0.7
3,642,894	-				-0.0
3,642,951	-		Pf1N1B4_3253	0.11	+1.7
3,643,160	+				-1.3
3,643,161	-		Pf1N1B4_3253	0.48	+0.4
3,643,161	-		Pf1N1B4_3253	0.48	-1.3
3,643,388	+		Pf1N1B4_3253	0.87	+0.1
3,643,388	+		Pf1N1B4_3253	0.87	-1.3
3,643,388	+		Pf1N1B4_3253	0.87	+0.4
3,643,388	+		Pf1N1B4_3253	0.87	-0.1
3,643,388	+		Pf1N1B4_3253	0.87	-0.0
3,643,389	-		Pf1N1B4_3253	0.87	+0.1