Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2634

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
2,971,655	+		Pf1N1B4_2633	0.56	-1.3
2,971,655	+		Pf1N1B4_2633	0.56	+1.2
2,971,655	+		Pf1N1B4_2633	0.56	+0.6
2,971,656	-		Pf1N1B4_2633	0.56	-1.4
2,971,656	-		Pf1N1B4_2633	0.56	-0.9
2,971,656	-		Pf1N1B4_2633	0.56	-0.6
2,971,656	-		Pf1N1B4_2633	0.56	+0.2
2,971,913	+		Pf1N1B4_2633	0.78	+0.0
2,971,913	+		Pf1N1B4_2633	0.78	+1.0
2,971,913	+		Pf1N1B4_2633	0.78	-1.3
2,971,914	-		Pf1N1B4_2633	0.78	+0.4
2,972,045	+		Pf1N1B4_2633	0.88	+1.4
2,972,046	-		Pf1N1B4_2633	0.89	+0.6
2,972,046	-		Pf1N1B4_2633	0.89	+1.5
2,972,103	+				-1.2
2,972,103	+				+0.8
2,972,103	+				-0.2
2,972,103	+				-0.2
2,972,103	+				-0.6
2,972,103	+				+0.6
2,972,103	+				-0.1
2,972,103	+				-2.0
2,972,104	-				+1.2
2,972,104	-				-1.0
2,972,104	-				+0.4
2,972,104	-				+0.3
2,972,104	-				-2.0
2,972,108	-				+0.3
2,972,108	-				+0.7
2,972,108	-				+1.0
2,972,108	-				-0.8
2,972,108	-				+1.3
2,972,248	+				-0.6
2,972,249	-				-0.6
2,972,350	+				+0.2
2,972,443	+				+0.5
2,972,443	+				-0.8
2,972,460	+				+0.4
2,972,460	+				-1.6
2,972,460	+				-0.6
2,972,460	+				-1.2
2,972,460	+				-0.2
2,972,461	-				-0.6
2,972,461	-				-0.8
2,972,461	-				-0.6
2,972,461	-				-0.2
2,972,461	-				-0.2
2,972,463	+				-0.3
2,972,463	+				+1.6
2,972,463	+				+1.0
2,972,463	+				-0.7
2,972,464	-				+1.3
2,972,464	-				-1.8
2,972,573	+				-1.8
2,972,748	-				-0.2
2,973,115	-		Pf1N1B4_2634	0.11	-1.3
2,973,478	+		Pf1N1B4_2634	0.20	-0.4
2,973,478	+		Pf1N1B4_2634	0.20	-0.2
2,973,478	+		Pf1N1B4_2634	0.20	+0.7
2,973,479	-		Pf1N1B4_2634	0.20	+0.4
2,973,479	-		Pf1N1B4_2634	0.20	+1.3
2,973,479	-		Pf1N1B4_2634	0.20	-0.2
2,973,479	-		Pf1N1B4_2634	0.20	-0.1
2,973,562	+		Pf1N1B4_2634	0.22	-0.3
2,973,562	+		Pf1N1B4_2634	0.22	+2.6
2,973,562	+				+1.8
2,973,562	+		Pf1N1B4_2634	0.22	-1.0
2,973,563	-		Pf1N1B4_2634	0.22	-1.0
2,973,563	-		Pf1N1B4_2634	0.22	+0.0
2,973,563	-		Pf1N1B4_2634	0.22	+0.2
2,973,588	-		Pf1N1B4_2634	0.23	+0.5
2,973,588	-		Pf1N1B4_2634	0.23	+1.0
2,973,588	-		Pf1N1B4_2634	0.23	-1.0
2,973,588	-		Pf1N1B4_2634	0.23	-0.2
2,973,791	+		Pf1N1B4_2634	0.27	+0.3
2,973,872	+		Pf1N1B4_2634	0.29	+1.0
2,973,872	+		Pf1N1B4_2634	0.29	+0.0
2,973,872	+		Pf1N1B4_2634	0.29	-0.8
2,973,872	+		Pf1N1B4_2634	0.29	-2.2
2,973,872	+		Pf1N1B4_2634	0.29	+0.7
2,973,872	+		Pf1N1B4_2634	0.29	-0.9
2,973,873	-		Pf1N1B4_2634	0.29	-0.2
2,973,873	-		Pf1N1B4_2634	0.29	-0.3
2,973,873	-		Pf1N1B4_2634	0.29	-0.2
2,973,873	-		Pf1N1B4_2634	0.29	-0.3
2,973,923	-		Pf1N1B4_2634	0.31	-1.2
2,974,073	+		Pf1N1B4_2634	0.34	-0.4
2,974,416	-		Pf1N1B4_2634	0.42	+1.0
2,974,416	-		Pf1N1B4_2634	0.42	+1.0
2,974,688	-		Pf1N1B4_2634	0.49	-0.2
2,974,688	-		Pf1N1B4_2634	0.49	+0.1
2,974,707	-		Pf1N1B4_2634	0.49	-1.4
2,974,791	+		Pf1N1B4_2634	0.51	+1.3
2,974,791	+		Pf1N1B4_2634	0.51	+1.0
2,974,791	+		Pf1N1B4_2634	0.51	-0.8
2,974,791	+		Pf1N1B4_2634	0.51	-0.6
2,974,791	+		Pf1N1B4_2634	0.51	-0.6
2,974,791	+		Pf1N1B4_2634	0.51	+0.2
2,974,792	-		Pf1N1B4_2634	0.51	+1.2
2,974,792	-		Pf1N1B4_2634	0.51	-0.7
2,974,792	-		Pf1N1B4_2634	0.51	+0.3
2,974,792	-		Pf1N1B4_2634	0.51	+0.0
2,975,048	-		Pf1N1B4_2634	0.57	+0.7
2,975,048	-		Pf1N1B4_2634	0.57	-1.8
2,975,081	+		Pf1N1B4_2634	0.58	-0.0
2,975,122	+		Pf1N1B4_2634	0.59	+0.3
2,975,123	-		Pf1N1B4_2634	0.59	+1.0
2,975,327	+		Pf1N1B4_2634	0.64	+2.0
2,975,334	+		Pf1N1B4_2634	0.64	+0.6
2,975,334	+		Pf1N1B4_2634	0.64	+0.0
2,975,335	-		Pf1N1B4_2634	0.64	-1.0
2,975,335	-		Pf1N1B4_2634	0.64	+0.3
2,975,335	-		Pf1N1B4_2634	0.64	+0.6
2,975,364	+		Pf1N1B4_2634	0.65	+0.5
2,975,364	+		Pf1N1B4_2634	0.65	+0.8
2,975,432	+		Pf1N1B4_2634	0.66	-1.0
2,975,432	+		Pf1N1B4_2634	0.66	-0.2
2,975,532	-		Pf1N1B4_2634	0.69	-2.2
2,975,562	-		Pf1N1B4_2634	0.70	-0.6
2,975,562	-		Pf1N1B4_2634	0.70	+0.0
2,976,156	-		Pf1N1B4_2634	0.84	-0.6
2,976,156	-		Pf1N1B4_2634	0.84	+1.6
2,976,156	-		Pf1N1B4_2634	0.84	-0.6
2,976,156	-		Pf1N1B4_2634	0.84	+0.2
2,976,156	-		Pf1N1B4_2634	0.84	+0.0
2,976,156	-		Pf1N1B4_2634	0.84	+1.6
2,976,214	+		Pf1N1B4_2634	0.85	-0.4
2,976,214	+		Pf1N1B4_2634	0.85	-0.2
2,976,214	+		Pf1N1B4_2634	0.85	-1.8
2,976,214	+		Pf1N1B4_2634	0.85	-0.1
2,976,214	+				+2.0
2,976,214	+		Pf1N1B4_2634	0.85	-0.4
2,976,214	+		Pf1N1B4_2634	0.85	-1.6
2,976,214	+		Pf1N1B4_2634	0.85	+1.0
2,976,214	+		Pf1N1B4_2634	0.85	-0.4
2,976,214	+		Pf1N1B4_2634	0.85	+1.4
2,976,214	+		Pf1N1B4_2634	0.85	-2.7
2,976,214	+		Pf1N1B4_2634	0.85	-1.8
2,976,214	+		Pf1N1B4_2634	0.85	+0.4
2,976,215	-		Pf1N1B4_2634	0.85	-0.2
2,976,215	-				-1.0
2,976,215	-		Pf1N1B4_2634	0.85	-0.7
2,976,215	-		Pf1N1B4_2634	0.85	-0.7
2,976,215	-		Pf1N1B4_2634	0.85	+1.3
2,976,215	-		Pf1N1B4_2634	0.85	+1.4
2,976,215	-		Pf1N1B4_2634	0.85	+0.0
2,976,215	-		Pf1N1B4_2634	0.85	+0.0
2,976,215	-		Pf1N1B4_2634	0.85	+2.4
2,976,215	-		Pf1N1B4_2634	0.85	-1.5
2,976,215	-		Pf1N1B4_2634	0.85	+1.1
2,976,215	-		Pf1N1B4_2634	0.85	+0.3
2,976,215	-		Pf1N1B4_2634	0.85	-2.7
2,976,488	+				+1.6
2,976,488	+				+0.6
2,976,489	-				-0.3
2,976,489	-				-0.6
2,976,489	-				-1.0
2,976,489	-				-1.0
2,976,489	-				-0.9
2,976,882	+				+0.9
2,976,965	-		Pf1N1B4_2635	0.26	+0.6
2,976,965	-		Pf1N1B4_2635	0.26	+2.1
2,976,965	-		Pf1N1B4_2635	0.26	+1.0
2,976,965	-		Pf1N1B4_2635	0.26	+1.7
2,976,992	+		Pf1N1B4_2635	0.39	+2.0
2,977,073	-		Pf1N1B4_2635	0.78	-0.2
2,977,073	-		Pf1N1B4_2635	0.78	+0.7
2,977,127	-				+0.4
2,977,152	+				-0.9
2,977,153	-				+1.0
2,977,153	-				+2.6
2,977,153	-				+0.3
2,977,153	-				-0.2
2,977,153	-				+1.2
2,977,153	-				-0.8
2,977,153	-				+0.4
2,977,153	-				+1.5
2,977,153	-				+0.8
2,977,160	-				+0.6
2,977,210	+				+1.2
2,977,279	+				+0.3
2,977,279	+				+1.3
2,977,279	+				+1.2
2,977,279	+				+0.6
2,977,279	+				+1.2
2,977,294	+				+1.0
2,977,294	+				+0.3
2,977,294	+				-1.8
2,977,294	+				+0.3
2,977,294	+				+1.0
2,977,294	+				-0.2
2,977,294	+				+1.0
2,977,294	+				-2.2
2,977,294	+				+0.5
2,977,294	+				+0.5
2,977,294	+				+0.0
2,977,294	+				+1.7
2,977,294	+				+0.3
2,977,294	+				+0.2
2,977,294	+				-1.6
2,977,294	+				+1.3
2,977,294	+				-0.2
2,977,294	+				+0.0
2,977,294	+				-1.0
2,977,294	+				-0.1
2,977,294	+				+0.1
2,977,294	+				+0.0
2,977,294	+				+0.3
2,977,294	+				+1.5
2,977,294	+				-0.4
2,977,294	+				-0.5
2,977,294	+				-1.0
2,977,294	+				+0.9
2,977,294	+				+3.3
2,977,294	+				+0.5
2,977,299	+				-1.7
2,977,299	+				+1.0
2,977,299	+				+0.8
2,977,459	+				+1.3
2,977,459	+				-2.7
2,977,462	+				+0.6
2,977,462	+				+1.5
2,977,462	+				-1.0
2,977,462	+				-0.2
2,977,462	+				-1.0
2,977,462	+				+0.3
2,977,462	+				+1.0
2,977,462	+				+2.3
2,977,462	+				+0.9
2,977,462	+				+0.2
2,977,462	+				+1.4
2,977,462	+				+1.5
2,977,462	+				+0.6
2,977,462	+				+0.0
2,977,462	+				+0.2
2,977,462	+				-0.2
2,977,462	+				+1.1
2,977,462	+				+1.0
2,977,585	+		Pf1N1B4_2637	0.20	+0.4
2,977,618	+		Pf1N1B4_2637	0.24	-0.1
2,977,618	+		Pf1N1B4_2637	0.24	+1.0