Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2631

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
2,968,121	-		Pf1N1B4_2630	0.28	-0.2
2,968,121	-		Pf1N1B4_2630	0.28	+0.6
2,968,147	+		Pf1N1B4_2630	0.30	-1.6
2,968,153	+		Pf1N1B4_2630	0.30	+1.1
2,968,153	+		Pf1N1B4_2630	0.30	-0.4
2,968,153	+		Pf1N1B4_2630	0.30	+1.2
2,968,215	+		Pf1N1B4_2630	0.35	+2.0
2,968,215	+		Pf1N1B4_2630	0.35	+0.8
2,968,279	+		Pf1N1B4_2630	0.40	-2.3
2,968,279	+		Pf1N1B4_2630	0.40	-0.3
2,968,280	-		Pf1N1B4_2630	0.40	-0.3
2,968,330	+		Pf1N1B4_2630	0.44	+2.0
2,968,331	-		Pf1N1B4_2630	0.44	-0.4
2,968,372	+		Pf1N1B4_2630	0.47	-1.0
2,968,373	-		Pf1N1B4_2630	0.47	+0.0
2,968,384	-		Pf1N1B4_2630	0.48	+0.2
2,968,447	+		Pf1N1B4_2630	0.53	-0.2
2,968,447	+		Pf1N1B4_2630	0.53	+0.3
2,968,448	-		Pf1N1B4_2630	0.53	+1.0
2,968,532	-		Pf1N1B4_2630	0.60	-2.7
2,968,689	+		Pf1N1B4_2630	0.72	-1.3
2,968,689	+		Pf1N1B4_2630	0.72	-1.5
2,968,690	-		Pf1N1B4_2630	0.72	-1.0
2,968,712	+				+2.3
2,968,713	-		Pf1N1B4_2630	0.74	-0.4
2,968,729	+				+0.0
2,968,729	+		Pf1N1B4_2630	0.75	-1.6
2,968,729	+		Pf1N1B4_2630	0.75	+0.1
2,968,730	-		Pf1N1B4_2630	0.75	-2.8
2,968,912	+		Pf1N1B4_2630	0.89	-1.3
2,968,912	+		Pf1N1B4_2630	0.89	+1.9
2,968,912	+		Pf1N1B4_2630	0.89	-0.4
2,968,912	+		Pf1N1B4_2630	0.89	-0.2
2,968,912	+		Pf1N1B4_2630	0.89	-1.2
2,968,912	+		Pf1N1B4_2630	0.89	-2.9
2,968,912	+		Pf1N1B4_2630	0.89	+0.3
2,968,913	-		Pf1N1B4_2630	0.89	-1.4
2,968,913	-		Pf1N1B4_2630	0.89	-2.2
2,968,913	-		Pf1N1B4_2630	0.89	-0.2
2,968,913	-		Pf1N1B4_2630	0.89	-0.4
2,968,963	+				-1.4
2,968,964	-				+0.0
2,968,964	-				+1.3
2,968,964	-				-0.4
2,968,965	+				-0.2
2,968,965	+				-2.3
2,968,965	+				+0.5
2,968,966	-				+0.0
2,968,966	-				+0.5
2,968,966	-				-2.0
2,968,966	-				-0.6
2,968,966	-				-0.3
2,969,051	+				+0.6
2,969,051	+				+0.0
2,969,051	+				-0.7
2,969,052	-				+1.0
2,969,052	-				+1.4
2,969,052	-				-0.4
2,969,052	-				-1.3
2,969,052	-				+1.0
2,969,114	+				+0.0
2,969,114	+				+1.0
2,969,114	+				-0.6
2,969,114	+				+1.0
2,969,148	+		Pf1N1B4_2631	0.13	-2.2
2,969,148	+		Pf1N1B4_2631	0.13	-0.6
2,969,149	-		Pf1N1B4_2631	0.13	-1.0
2,969,149	-		Pf1N1B4_2631	0.13	-1.8
2,969,149	-		Pf1N1B4_2631	0.13	+0.6
2,969,149	-		Pf1N1B4_2631	0.13	+0.4
2,969,149	-		Pf1N1B4_2631	0.13	-0.6
2,969,149	-		Pf1N1B4_2631	0.13	-0.7
2,969,149	-		Pf1N1B4_2631	0.13	-0.3
2,969,149	-		Pf1N1B4_2631	0.13	-1.3
2,969,149	-		Pf1N1B4_2631	0.13	-2.2
2,969,149	-		Pf1N1B4_2631	0.13	+0.3
2,969,191	+		Pf1N1B4_2631	0.18	-1.3
2,969,191	+		Pf1N1B4_2631	0.18	-2.0
2,969,191	+		Pf1N1B4_2631	0.18	-0.9
2,969,326	+		Pf1N1B4_2631	0.35	-1.0
2,969,326	+		Pf1N1B4_2631	0.35	-1.4
2,969,326	+		Pf1N1B4_2631	0.35	-0.6
2,969,326	+		Pf1N1B4_2631	0.35	-1.0
2,969,327	-		Pf1N1B4_2631	0.35	-0.6
2,969,327	-		Pf1N1B4_2631	0.35	+0.0
2,969,327	-		Pf1N1B4_2631	0.35	-1.3
2,969,327	-		Pf1N1B4_2631	0.35	-0.3
2,969,327	-		Pf1N1B4_2631	0.35	+1.0
2,969,327	-		Pf1N1B4_2631	0.35	+0.0
2,969,599	-		Pf1N1B4_2631	0.69	-1.0
2,969,625	+		Pf1N1B4_2631	0.72	-1.3
2,969,626	-		Pf1N1B4_2631	0.72	-2.6
2,969,798	-				+1.6
2,969,798	-				-0.6
2,969,798	-				-0.6
2,969,966	+		Pf1N1B4_2632	0.14	+0.7
2,969,966	+		Pf1N1B4_2632	0.14	+0.3
2,969,967	-		Pf1N1B4_2632	0.14	-1.6
2,969,974	+		Pf1N1B4_2632	0.15	+1.0
2,969,974	+		Pf1N1B4_2632	0.15	+0.4
2,969,974	+		Pf1N1B4_2632	0.15	-0.9
2,969,974	+		Pf1N1B4_2632	0.15	-0.6
2,969,975	-		Pf1N1B4_2632	0.15	+2.2
2,969,975	-				+0.0
2,970,110	+		Pf1N1B4_2632	0.30	+0.6
2,970,215	+		Pf1N1B4_2632	0.42	+0.4
2,970,215	+		Pf1N1B4_2632	0.42	-1.6
2,970,216	-		Pf1N1B4_2632	0.42	-0.2
2,970,216	-		Pf1N1B4_2632	0.42	-0.7
2,970,380	-		Pf1N1B4_2632	0.61	+0.2
2,970,507	+		Pf1N1B4_2632	0.75	-1.0
2,970,507	+		Pf1N1B4_2632	0.75	+1.8
2,970,508	-		Pf1N1B4_2632	0.76	+0.6
2,970,540	+		Pf1N1B4_2632	0.79	+1.6
2,970,602	+		Pf1N1B4_2632	0.86	-0.5
2,970,603	-		Pf1N1B4_2632	0.86	-1.3
2,970,627	-		Pf1N1B4_2632	0.89	+0.0
2,970,730	+				-1.3
2,970,746	+				+0.5
2,970,746	+				+0.0
2,970,746	+				-0.3
2,970,753	-				+2.0
2,970,753	-				+0.3