Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1964

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
2,243,589	+		Pf1N1B4_1962	0.85	-1.3
2,243,590	-		Pf1N1B4_1962	0.85	-0.1
2,243,590	-		Pf1N1B4_1962	0.85	-1.4
2,243,590	-		Pf1N1B4_1962	0.85	-0.1
2,243,653	+				-1.3
2,243,654	-				-0.5
2,243,654	-				-0.1
2,243,654	-				-0.8
2,243,738	+				-0.3
2,243,747	+				+0.3
2,243,747	+				+1.0
2,243,748	-				-1.9
2,243,748	-				+0.3
2,243,773	+				-0.7
2,243,773	+				+0.4
2,243,773	+				+0.0
2,243,773	+				+1.3
2,243,773	+				-0.3
2,243,773	+				+0.5
2,243,773	+				-2.5
2,243,773	+				+0.9
2,243,773	+				+1.3
2,243,773	+				+0.2
2,243,774	-				-0.5
2,243,774	-				+0.3
2,243,774	-				-0.3
2,243,774	-				+0.1
2,243,774	-				-0.1
2,243,774	-				-0.7
2,243,774	-				-2.0
2,243,774	-				+1.7
2,243,774	-				+0.0
2,243,920	+		Pf1N1B4_1963	0.17	+0.6
2,243,921	-		Pf1N1B4_1963	0.17	+1.3
2,243,921	-				-1.3
2,244,364	+		Pf1N1B4_1963	0.73	-2.2
2,244,364	+		Pf1N1B4_1963	0.73	+0.1
2,244,365	-		Pf1N1B4_1963	0.73	-1.5
2,244,365	-		Pf1N1B4_1963	0.73	+0.7
2,244,365	-		Pf1N1B4_1963	0.73	-2.1
2,244,365	-		Pf1N1B4_1963	0.73	-1.0
2,244,365	-		Pf1N1B4_1963	0.73	+0.6
2,244,373	+		Pf1N1B4_1963	0.74	+0.9
2,244,373	+		Pf1N1B4_1963	0.74	-0.3
2,244,374	-		Pf1N1B4_1963	0.74	-0.9
2,244,374	-		Pf1N1B4_1963	0.74	+1.8
2,244,374	-		Pf1N1B4_1963	0.74	-1.7
2,244,436	+		Pf1N1B4_1963	0.82	+0.7
2,244,436	+				+1.3
2,244,436	+		Pf1N1B4_1963	0.82	-0.3
2,244,437	-		Pf1N1B4_1963	0.82	-1.0
2,244,437	-		Pf1N1B4_1963	0.82	+0.1
2,244,637	+				+0.2
2,244,637	+				+0.3
2,244,637	+				+1.3
2,244,637	+				-0.2
2,244,637	+				-0.5
2,244,638	-				-0.1
2,244,857	+		Pf1N1B4_1964	0.19	-0.6
2,244,858	-		Pf1N1B4_1964	0.19	-0.7
2,244,898	+		Pf1N1B4_1964	0.22	-1.3
2,244,898	+		Pf1N1B4_1964	0.22	+0.1
2,244,898	+		Pf1N1B4_1964	0.22	-1.3
2,244,898	+		Pf1N1B4_1964	0.22	-0.3
2,244,898	+		Pf1N1B4_1964	0.22	+0.3
2,244,898	+				-1.5
2,244,898	+		Pf1N1B4_1964	0.22	-0.3
2,244,899	-		Pf1N1B4_1964	0.22	+0.9
2,244,899	-		Pf1N1B4_1964	0.22	-0.8
2,244,899	-		Pf1N1B4_1964	0.22	-0.2
2,244,899	-		Pf1N1B4_1964	0.22	-1.0
2,244,899	-		Pf1N1B4_1964	0.22	+0.9
2,244,899	-		Pf1N1B4_1964	0.22	+0.4
2,244,899	-		Pf1N1B4_1964	0.22	+3.3
2,244,938	-		Pf1N1B4_1964	0.25	+0.7
2,245,047	-		Pf1N1B4_1964	0.32	-1.0
2,245,250	-		Pf1N1B4_1964	0.46	-1.0
2,245,460	-		Pf1N1B4_1964	0.61	+1.3
2,245,460	-		Pf1N1B4_1964	0.61	+0.7
2,245,460	-		Pf1N1B4_1964	0.61	-1.4
2,245,837	+		Pf1N1B4_1964	0.87	-1.5
2,245,837	+		Pf1N1B4_1964	0.87	-0.4
2,245,837	+		Pf1N1B4_1964	0.87	+0.7
2,245,838	-		Pf1N1B4_1964	0.87	+1.1
2,245,838	-		Pf1N1B4_1964	0.87	+1.3
2,245,838	-		Pf1N1B4_1964	0.87	-2.3
2,245,838	-		Pf1N1B4_1964	0.87	-1.9
2,245,838	-		Pf1N1B4_1964	0.87	-0.7
2,245,838	-		Pf1N1B4_1964	0.87	+0.3
2,245,838	-				+0.7
2,245,838	-		Pf1N1B4_1964	0.87	-1.0
2,245,840	+		Pf1N1B4_1964	0.87	-2.5
2,245,840	+		Pf1N1B4_1964	0.87	-1.0
2,245,910	+				+0.9
2,245,911	-				+0.2
2,245,911	-				-1.3
2,245,911	-				-0.9
2,245,911	-				-2.6
2,246,029	+				-0.8
2,246,030	-				+0.8
2,246,030	-				+0.3
2,246,151	+		Pf1N1B4_1965	0.13	+0.3
2,246,152	-		Pf1N1B4_1965	0.13	-0.3
2,246,191	+		Pf1N1B4_1965	0.17	-1.5
2,246,191	+		Pf1N1B4_1965	0.17	+1.5
2,246,192	-		Pf1N1B4_1965	0.17	+0.9
2,246,201	-		Pf1N1B4_1965	0.18	+1.3
2,246,201	-		Pf1N1B4_1965	0.18	+0.6
2,246,275	+		Pf1N1B4_1965	0.25	+0.6
2,246,275	+		Pf1N1B4_1965	0.25	+0.7
2,246,275	+		Pf1N1B4_1965	0.25	+1.0
2,246,275	+		Pf1N1B4_1965	0.25	+0.4
2,246,275	+		Pf1N1B4_1965	0.25	+2.3
2,246,275	+		Pf1N1B4_1965	0.25	+0.7
2,246,275	+		Pf1N1B4_1965	0.25	-0.9
2,246,275	+		Pf1N1B4_1965	0.25	+0.4
2,246,275	+		Pf1N1B4_1965	0.25	-0.9
2,246,275	+		Pf1N1B4_1965	0.25	-1.2
2,246,276	-		Pf1N1B4_1965	0.26	+0.8
2,246,276	-		Pf1N1B4_1965	0.26	-1.3
2,246,276	-		Pf1N1B4_1965	0.26	-0.1
2,246,276	-		Pf1N1B4_1965	0.26	-0.7
2,246,276	-		Pf1N1B4_1965	0.26	-0.0
2,246,276	-		Pf1N1B4_1965	0.26	-0.0
2,246,323	+		Pf1N1B4_1965	0.30	+1.3
2,246,323	+		Pf1N1B4_1965	0.30	-0.8
2,246,324	-		Pf1N1B4_1965	0.30	-0.1
2,246,533	+		Pf1N1B4_1965	0.52	-0.2
2,246,635	+		Pf1N1B4_1965	0.62	-1.0
2,246,635	+		Pf1N1B4_1965	0.62	-0.3
2,246,635	+		Pf1N1B4_1965	0.62	+1.3
2,246,636	-		Pf1N1B4_1965	0.63	-0.7
2,246,636	-		Pf1N1B4_1965	0.63	+2.5
2,246,636	-		Pf1N1B4_1965	0.63	-0.6
2,246,636	-		Pf1N1B4_1965	0.63	-1.0
2,246,636	-		Pf1N1B4_1965	0.63	-0.7
2,246,764	+		Pf1N1B4_1965	0.76	-1.6
2,246,764	+		Pf1N1B4_1965	0.76	+1.5
2,246,765	-		Pf1N1B4_1965	0.76	-0.1
2,246,765	-		Pf1N1B4_1965	0.76	+1.3
2,246,837	-		Pf1N1B4_1965	0.83	+0.7
2,246,918	+				-1.5
2,246,918	+				+0.9
2,246,918	+				+0.8
2,246,918	+				-0.8
2,246,918	+				+0.7
2,246,919	-				-0.0
2,246,919	-				-2.8
2,246,919	-				+1.3
2,246,919	-				+0.1
2,246,919	-				+2.9
2,246,919	-				+0.7
2,246,919	-				-1.7
2,246,919	-				-0.7
2,246,919	-				+1.3
2,246,920	+				+0.9
2,246,950	+				+1.7