Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1695

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
1,940,417	+		Pf1N1B4_1693	0.60	+0.9
1,940,417	+		Pf1N1B4_1693	0.60	-0.4
1,940,417	+		Pf1N1B4_1693	0.60	-1.4
1,940,417	+		Pf1N1B4_1693	0.60	+0.4
1,940,417	+		Pf1N1B4_1693	0.60	+0.5
1,940,418	-		Pf1N1B4_1693	0.60	-1.9
1,940,418	-		Pf1N1B4_1693	0.60	-0.4
1,940,418	-		Pf1N1B4_1693	0.60	+1.0
1,940,418	-		Pf1N1B4_1693	0.60	+0.4
1,940,418	-		Pf1N1B4_1693	0.60	+2.2
1,940,446	+				-1.1
1,940,446	+		Pf1N1B4_1693	0.63	-0.6
1,940,446	+		Pf1N1B4_1693	0.63	+0.6
1,940,447	-		Pf1N1B4_1693	0.63	-1.1
1,940,465	+		Pf1N1B4_1693	0.66	-1.9
1,940,465	+		Pf1N1B4_1693	0.66	-0.5
1,940,465	+		Pf1N1B4_1693	0.66	+0.8
1,940,465	+		Pf1N1B4_1693	0.66	+0.1
1,940,465	+				+1.2
1,940,465	+		Pf1N1B4_1693	0.66	+0.4
1,940,466	-		Pf1N1B4_1693	0.66	-2.1
1,940,466	-		Pf1N1B4_1693	0.66	+0.5
1,940,686	+				-1.1
1,940,711	+				+0.0
1,940,712	-				-0.4
1,940,712	-				+1.8
1,940,794	+				-1.4
1,940,794	+				-2.4
1,940,797	+				-0.9
1,940,798	-				-1.0
1,940,798	-				+1.6
1,940,798	-				-1.1
1,940,798	-				-1.9
1,940,798	-				-1.4
1,940,798	-				+0.2
1,940,908	+		Pf1N1B4_1694	0.26	+0.6
1,940,908	+		Pf1N1B4_1694	0.26	-1.4
1,940,908	+		Pf1N1B4_1694	0.26	+1.9
1,940,908	+		Pf1N1B4_1694	0.26	+0.6
1,940,908	+		Pf1N1B4_1694	0.26	+0.6
1,940,908	+		Pf1N1B4_1694	0.26	+0.2
1,940,908	+		Pf1N1B4_1694	0.26	+1.0
1,940,908	+		Pf1N1B4_1694	0.26	+0.8
1,940,909	-		Pf1N1B4_1694	0.26	+2.2
1,940,909	-		Pf1N1B4_1694	0.26	-0.6
1,940,909	-		Pf1N1B4_1694	0.26	+0.0
1,940,909	-		Pf1N1B4_1694	0.26	+0.2
1,940,909	-		Pf1N1B4_1694	0.26	-0.4
1,940,909	-		Pf1N1B4_1694	0.26	+0.5
1,940,959	+		Pf1N1B4_1694	0.33	+1.0
1,940,959	+		Pf1N1B4_1694	0.33	-1.6
1,940,959	+		Pf1N1B4_1694	0.33	-0.6
1,940,959	+		Pf1N1B4_1694	0.33	-0.0
1,940,959	+		Pf1N1B4_1694	0.33	+1.2
1,940,959	+		Pf1N1B4_1694	0.33	-0.5
1,940,959	+		Pf1N1B4_1694	0.33	+0.2
1,940,959	+		Pf1N1B4_1694	0.33	+0.1
1,940,959	+		Pf1N1B4_1694	0.33	+0.6
1,940,960	-		Pf1N1B4_1694	0.33	+0.7
1,940,960	-		Pf1N1B4_1694	0.33	+0.6
1,940,960	-		Pf1N1B4_1694	0.33	-1.1
1,940,962	+		Pf1N1B4_1694	0.34	-1.7
1,941,041	-		Pf1N1B4_1694	0.46	-0.8
1,941,195	+		Pf1N1B4_1694	0.69	-0.8
1,941,195	+		Pf1N1B4_1694	0.69	-1.1
1,941,195	+		Pf1N1B4_1694	0.69	+0.9
1,941,195	+		Pf1N1B4_1694	0.69	+1.0
1,941,196	-		Pf1N1B4_1694	0.69	+0.5
1,941,301	+		Pf1N1B4_1694	0.85	-0.4
1,941,301	+		Pf1N1B4_1694	0.85	+1.5
1,941,301	+		Pf1N1B4_1694	0.85	+0.1
1,941,301	+		Pf1N1B4_1694	0.85	+1.1
1,941,301	+		Pf1N1B4_1694	0.85	+2.0
1,941,301	+		Pf1N1B4_1694	0.85	-0.8
1,941,301	+		Pf1N1B4_1694	0.85	-0.8
1,941,301	+		Pf1N1B4_1694	0.85	+0.4
1,941,301	+		Pf1N1B4_1694	0.85	-1.0
1,941,301	+		Pf1N1B4_1694	0.85	-1.2
1,941,301	+		Pf1N1B4_1694	0.85	-0.4
1,941,301	+		Pf1N1B4_1694	0.85	-0.4
1,941,301	+		Pf1N1B4_1694	0.85	-1.6
1,941,301	+		Pf1N1B4_1694	0.85	-0.3
1,941,301	+		Pf1N1B4_1694	0.85	+0.2
1,941,301	+		Pf1N1B4_1694	0.85	+0.3
1,941,302	-		Pf1N1B4_1694	0.85	-1.6
1,941,302	-		Pf1N1B4_1694	0.85	+2.9
1,941,302	-		Pf1N1B4_1694	0.85	+0.3
1,941,302	-		Pf1N1B4_1694	0.85	-0.8
1,941,302	-		Pf1N1B4_1694	0.85	-0.6
1,941,302	-		Pf1N1B4_1694	0.85	+0.9
1,941,302	-		Pf1N1B4_1694	0.85	+0.3
1,941,302	-		Pf1N1B4_1694	0.85	-0.4
1,941,302	-		Pf1N1B4_1694	0.85	+0.1
1,941,302	-		Pf1N1B4_1694	0.85	+2.8
1,941,302	-		Pf1N1B4_1694	0.85	-1.9
1,941,302	-		Pf1N1B4_1694	0.85	-0.4
1,941,302	-		Pf1N1B4_1694	0.85	+1.1
1,941,302	-		Pf1N1B4_1694	0.85	+1.4
1,941,302	-		Pf1N1B4_1694	0.85	-0.4
1,941,302	-		Pf1N1B4_1694	0.85	-1.1
1,941,302	-		Pf1N1B4_1694	0.85	+1.6
1,941,322	+		Pf1N1B4_1694	0.88	+1.1
1,941,322	+		Pf1N1B4_1694	0.88	-0.6
1,941,323	-		Pf1N1B4_1694	0.88	+1.7
1,941,323	-		Pf1N1B4_1694	0.88	-0.6
1,941,323	-		Pf1N1B4_1694	0.88	+0.6
1,941,341	+				+0.5
1,941,341	+				+1.1
1,941,341	+				-0.0
1,941,341	+				+0.2
1,941,565	+		Pf1N1B4_1695	0.21	+1.8
1,941,822	-		Pf1N1B4_1695	0.55	-1.2
1,941,858	+		Pf1N1B4_1695	0.60	-2.0
1,942,155	-				+0.6
1,942,266	-				+2.0
1,942,296	+				+2.2
1,942,297	-				+2.8
1,942,297	-				+0.2
1,942,297	-				-0.9
1,942,297	-				-1.4
1,942,297	-				-0.0
1,942,297	-				-0.4
1,942,297	-				+1.2
1,942,297	-				+1.7
1,942,297	-				+0.4
1,942,299	-				-0.2
1,942,299	-				-1.8
1,942,299	-				+0.6
1,942,299	-				-0.4
1,942,299	-				-1.4
1,942,299	-				-0.9
1,942,301	-				-0.2
1,942,301	-				+0.8
1,942,301	-				+1.2
1,942,341	+				-0.4
1,942,341	+				+0.7
1,942,383	+				+0.2
1,942,384	-				-0.2
1,942,384	-				+1.2
1,942,384	-				+1.2
1,942,384	-				+0.7
1,942,384	-				+0.0
1,942,397	+				+0.5
1,942,397	+				+2.2
1,942,397	+				-0.6
1,942,398	-				+1.2
1,942,430	-				-0.6
1,942,439	-				-0.9
1,942,520	-				+3.2
1,942,520	-				-1.1
1,942,700	-				+0.9
1,942,753	+		Pf1N1B4_1696	0.12	+1.6
1,942,753	+		Pf1N1B4_1696	0.12	+0.5
1,942,753	+		Pf1N1B4_1696	0.12	+1.2
1,942,753	+		Pf1N1B4_1696	0.12	-1.9
1,942,753	+		Pf1N1B4_1696	0.12	+0.6
1,942,754	-		Pf1N1B4_1696	0.12	-0.2
1,942,754	-		Pf1N1B4_1696	0.12	-0.4
1,942,823	+		Pf1N1B4_1696	0.21	-1.4
1,942,824	-		Pf1N1B4_1696	0.21	+0.2
1,942,824	-		Pf1N1B4_1696	0.21	-1.1
1,942,922	+		Pf1N1B4_1696	0.34	+0.5
1,942,922	+		Pf1N1B4_1696	0.34	-1.4
1,942,922	+		Pf1N1B4_1696	0.34	+1.2
1,942,923	-		Pf1N1B4_1696	0.34	-0.3
1,942,930	+		Pf1N1B4_1696	0.35	-1.3
1,943,129	+		Pf1N1B4_1696	0.61	+2.2