Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1690

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
1,936,641	+		Pf1N1B4_1689	0.76	-0.6
1,936,641	+		Pf1N1B4_1689	0.76	+0.4
1,936,642	-		Pf1N1B4_1689	0.76	+0.8
1,936,642	-		Pf1N1B4_1689	0.76	+0.2
1,936,658	+		Pf1N1B4_1689	0.77	+1.1
1,936,659	-		Pf1N1B4_1689	0.77	-0.0
1,936,869	-		Pf1N1B4_1689	0.88	+0.8
1,936,869	-		Pf1N1B4_1689	0.88	+0.6
1,936,952	+				-0.4
1,936,952	+				+0.1
1,936,952	+				+0.0
1,936,953	-				+0.6
1,936,953	-				+0.5
1,936,973	+				+0.9
1,936,973	+				+1.5
1,936,973	+				+0.1
1,936,973	+				-1.1
1,936,973	+				+0.0
1,936,973	+				-0.2
1,936,973	+				-0.9
1,936,973	+				+1.2
1,936,974	-				+0.4
1,936,974	-				+0.2
1,936,974	-				+1.0
1,936,974	-				-1.1
1,936,974	-				-0.8
1,936,974	-				+0.6
1,936,974	-				+0.7
1,936,976	+				+0.2
1,936,977	-				+1.1
1,936,977	-				+0.8
1,937,090	+				-0.4
1,937,090	+				+0.4
1,937,244	-				-0.6
1,937,265	+				-0.9
1,937,291	-				+0.1
1,937,309	+				-0.1
1,937,323	+				-0.4
1,937,323	+				+1.2
1,937,376	+				+0.2
1,937,380	+				-0.0
1,937,381	-				-1.6
1,937,381	-				-0.9
1,937,381	-				-0.5
1,937,458	+				+2.0
1,937,459	-				+1.2
1,937,459	-				-0.2
1,937,459	-				-0.9
1,937,535	+				-0.4
1,937,535	+				-0.8
1,937,536	-				+0.1
1,937,536	-				-0.8
1,937,536	-				-1.2
1,937,676	+		Pf1N1B4_1690	0.15	-0.1
1,937,676	+		Pf1N1B4_1690	0.15	-0.1
1,937,677	-		Pf1N1B4_1690	0.15	-1.0
1,937,677	-		Pf1N1B4_1690	0.15	-2.2
1,937,782	-		Pf1N1B4_1690	0.27	-1.2
1,937,782	-		Pf1N1B4_1690	0.27	+0.1
1,937,782	-		Pf1N1B4_1690	0.27	-1.6
1,938,056	+		Pf1N1B4_1690	0.56	+0.6
1,938,057	-		Pf1N1B4_1690	0.56	-0.6
1,938,237	+		Pf1N1B4_1690	0.76	-0.1
1,938,238	-		Pf1N1B4_1690	0.76	-1.1
1,938,238	-		Pf1N1B4_1690	0.76	-1.4
1,938,238	-		Pf1N1B4_1690	0.76	-1.6
1,938,512	+		Pf1N1B4_1691	0.63	-1.1
1,938,512	+		Pf1N1B4_1691	0.63	+0.3
1,938,512	+		Pf1N1B4_1691	0.63	-0.8
1,938,541	+		Pf1N1B4_1691	0.89	+1.6
1,938,572	+				-0.4
1,938,576	+				-0.5
1,938,601	+				-1.6
1,938,601	+				+3.3
1,938,602	-				-1.8
1,938,615	+				+0.8
1,938,615	+				+1.0
1,938,615	+				+0.6
1,938,615	+				+0.4
1,938,615	+				+0.6
1,938,615	+				+0.2
1,938,615	+				+1.2
1,938,616	-				-0.8
1,938,616	-				+0.3
1,938,616	-				-1.1
1,938,616	-				-0.8
1,938,617	+				-2.2
1,938,617	+				+0.2
1,938,756	+		Pf1N1B4_1692	0.11	+0.6
1,938,756	+		Pf1N1B4_1692	0.11	+0.8
1,938,756	+		Pf1N1B4_1692	0.11	+0.5
1,938,757	-		Pf1N1B4_1692	0.11	-0.8
1,938,757	-				+0.9
1,938,757	-		Pf1N1B4_1692	0.11	+0.6
1,938,757	-		Pf1N1B4_1692	0.11	+1.2
1,938,757	-		Pf1N1B4_1692	0.11	+0.5
1,938,757	-				+0.6
1,938,757	-		Pf1N1B4_1692	0.11	-0.8
1,938,757	-		Pf1N1B4_1692	0.11	+1.0
1,938,819	+		Pf1N1B4_1692	0.17	+0.8
1,938,854	+		Pf1N1B4_1692	0.20	+1.2
1,938,854	+		Pf1N1B4_1692	0.20	+0.9
1,938,854	+		Pf1N1B4_1692	0.20	-0.2
1,938,854	+		Pf1N1B4_1692	0.20	+0.6
1,938,854	+		Pf1N1B4_1692	0.20	-2.1
1,938,854	+		Pf1N1B4_1692	0.20	-0.4
1,938,855	-		Pf1N1B4_1692	0.21	-2.2
1,938,855	-		Pf1N1B4_1692	0.21	+0.8
1,938,978	+		Pf1N1B4_1692	0.33	-0.0
1,938,978	+		Pf1N1B4_1692	0.33	-0.8
1,938,978	+		Pf1N1B4_1692	0.33	-1.1
1,938,978	+		Pf1N1B4_1692	0.33	-0.8
1,938,978	+		Pf1N1B4_1692	0.33	-0.7
1,938,978	+		Pf1N1B4_1692	0.33	-0.2
1,938,978	+		Pf1N1B4_1692	0.33	+0.2
1,938,978	+		Pf1N1B4_1692	0.33	-1.6
1,938,978	+		Pf1N1B4_1692	0.33	-0.6
1,938,978	+		Pf1N1B4_1692	0.33	-0.9
1,938,978	+		Pf1N1B4_1692	0.33	+2.0
1,938,978	+		Pf1N1B4_1692	0.33	+3.7
1,938,979	-		Pf1N1B4_1692	0.33	+0.6
1,938,979	-		Pf1N1B4_1692	0.33	-0.5
1,938,979	-		Pf1N1B4_1692	0.33	-0.4
1,938,979	-		Pf1N1B4_1692	0.33	-0.4
1,938,979	-		Pf1N1B4_1692	0.33	+0.5
1,938,979	-		Pf1N1B4_1692	0.33	+0.8
1,938,979	-		Pf1N1B4_1692	0.33	+2.1
1,938,979	-		Pf1N1B4_1692	0.33	-1.4
1,938,979	-		Pf1N1B4_1692	0.33	+2.6
1,938,979	-		Pf1N1B4_1692	0.33	+0.2
1,938,979	-		Pf1N1B4_1692	0.33	+1.2
1,938,981	-		Pf1N1B4_1692	0.33	+2.2
1,939,110	+		Pf1N1B4_1692	0.46	-1.2
1,939,111	-		Pf1N1B4_1692	0.46	+0.8
1,939,111	-		Pf1N1B4_1692	0.46	+1.0
1,939,111	-				-0.4
1,939,155	+		Pf1N1B4_1692	0.51	-0.7
1,939,156	-		Pf1N1B4_1692	0.51	-1.2
1,939,156	-		Pf1N1B4_1692	0.51	+0.1
1,939,425	+		Pf1N1B4_1692	0.78	-0.8
1,939,425	+		Pf1N1B4_1692	0.78	-0.9
1,939,425	+		Pf1N1B4_1692	0.78	-0.1
1,939,425	+		Pf1N1B4_1692	0.78	+1.2
1,939,425	+		Pf1N1B4_1692	0.78	+1.6
1,939,425	+		Pf1N1B4_1692	0.78	-0.6
1,939,426	-		Pf1N1B4_1692	0.78	+0.4
1,939,426	-		Pf1N1B4_1692	0.78	+0.6