Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1287

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
1,468,945	+				+0.0
1,468,945	+		Pf1N1B4_1286	0.68	-1.0
1,468,945	+		Pf1N1B4_1286	0.68	-0.3
1,468,945	+		Pf1N1B4_1286	0.68	-1.6
1,468,946	-		Pf1N1B4_1286	0.68	-2.4
1,468,946	-		Pf1N1B4_1286	0.68	-0.3
1,468,946	-		Pf1N1B4_1286	0.68	+0.4
1,469,103	+		Pf1N1B4_1286	0.76	+2.3
1,469,284	-		Pf1N1B4_1286	0.86	-1.8
1,469,299	-		Pf1N1B4_1286	0.86	+0.4
1,469,393	+				+0.1
1,469,492	+				-2.7
1,469,492	+				+0.1
1,469,492	+				+0.7
1,469,650	+				-0.2
1,469,650	+				+1.0
1,469,674	+				+1.0
1,469,674	+				-0.0
1,469,675	-				-0.4
1,469,745	+				-0.7
1,469,745	+				+1.6
1,469,745	+				-0.3
1,469,746	-				-1.0
1,469,746	-				-0.3
1,469,746	-				+1.6
1,469,746	-				+0.3
1,469,857	-				-0.7
1,469,857	-				-0.6
1,469,881	-				+0.8
1,469,881	-				+1.0
1,469,917	+				+2.0
1,469,918	-				-1.6
1,469,923	+		Pf1N1B4_1287	0.10	+0.0
1,469,924	-		Pf1N1B4_1287	0.10	+0.4
1,469,950	+		Pf1N1B4_1287	0.15	+0.0
1,469,951	-		Pf1N1B4_1287	0.15	-0.6
1,470,033	+		Pf1N1B4_1287	0.30	-0.4
1,470,033	+				+2.6
1,470,033	+		Pf1N1B4_1287	0.30	-0.0
1,470,033	+		Pf1N1B4_1287	0.30	-1.3
1,470,034	-		Pf1N1B4_1287	0.30	-0.8
1,470,057	+		Pf1N1B4_1287	0.34	-0.3
1,470,057	+		Pf1N1B4_1287	0.34	+0.0
1,470,057	+		Pf1N1B4_1287	0.34	-1.3
1,470,057	+		Pf1N1B4_1287	0.34	-2.0
1,470,058	-		Pf1N1B4_1287	0.34	-0.4
1,470,058	-		Pf1N1B4_1287	0.34	-1.3
1,470,058	-		Pf1N1B4_1287	0.34	-1.0
1,470,108	+		Pf1N1B4_1287	0.43	+0.2
1,470,316	+		Pf1N1B4_1287	0.80	-1.6
1,470,316	+		Pf1N1B4_1287	0.80	+1.0
1,470,316	+		Pf1N1B4_1287	0.80	-0.9
1,470,316	+		Pf1N1B4_1287	0.80	-0.6
1,470,317	-		Pf1N1B4_1287	0.81	-0.1
1,470,317	-		Pf1N1B4_1287	0.81	-1.3
1,470,438	+				+1.0
1,470,479	+				+0.8
1,470,479	+				+0.3
1,470,480	-				-0.9
1,470,480	-				+0.0
1,470,480	-				+0.6
1,470,480	-				+1.0
1,470,483	+				+1.0
1,470,483	+				+1.6
1,470,483	+				-0.6
1,470,483	+				-0.6
1,470,484	-				+0.6
1,470,484	-				+1.1
1,470,484	-				-0.3
1,470,484	-				-0.3
1,470,484	-				+0.7
1,470,637	+		Pf1N1B4_1288	0.26	+0.5
1,470,638	-		Pf1N1B4_1288	0.26	+0.9
1,470,638	-		Pf1N1B4_1288	0.26	-0.2
1,470,644	+		Pf1N1B4_1288	0.27	-1.0
1,470,644	+		Pf1N1B4_1288	0.27	-2.0
1,470,644	+		Pf1N1B4_1288	0.27	-0.1
1,470,645	-		Pf1N1B4_1288	0.27	+0.4
1,470,671	+		Pf1N1B4_1288	0.31	+0.4
1,470,671	+		Pf1N1B4_1288	0.31	+0.4
1,470,671	+		Pf1N1B4_1288	0.31	-0.6
1,470,671	+		Pf1N1B4_1288	0.31	+0.0
1,470,671	+		Pf1N1B4_1288	0.31	+0.4
1,470,672	-		Pf1N1B4_1288	0.31	+1.6
1,470,672	-		Pf1N1B4_1288	0.31	-1.1
1,470,672	-		Pf1N1B4_1288	0.31	-0.6
1,470,672	-		Pf1N1B4_1288	0.31	-2.7
1,470,672	-		Pf1N1B4_1288	0.31	+0.1
1,470,672	-		Pf1N1B4_1288	0.31	+1.2
1,470,672	-		Pf1N1B4_1288	0.31	-0.4
1,470,701	+		Pf1N1B4_1288	0.36	+0.6
1,471,028	+		Pf1N1B4_1288	0.89	-0.9
1,471,028	+		Pf1N1B4_1288	0.89	-0.8
1,471,029	-		Pf1N1B4_1288	0.89	+0.6
1,471,029	-		Pf1N1B4_1288	0.89	+1.4
1,471,029	-		Pf1N1B4_1288	0.89	-0.1
1,471,029	-		Pf1N1B4_1288	0.89	-0.8
1,471,202	-		Pf1N1B4_1289	0.13	+0.0
1,471,235	+		Pf1N1B4_1289	0.17	-0.6
1,471,235	+		Pf1N1B4_1289	0.17	-1.6
1,471,235	+		Pf1N1B4_1289	0.17	-2.0
1,471,235	+		Pf1N1B4_1289	0.17	-2.7
1,471,236	-		Pf1N1B4_1289	0.17	+0.0
1,471,236	-		Pf1N1B4_1289	0.17	+0.5
1,471,236	-		Pf1N1B4_1289	0.17	+0.4
1,471,236	-		Pf1N1B4_1289	0.17	-1.0
1,471,236	-		Pf1N1B4_1289	0.17	-0.2
1,471,236	-		Pf1N1B4_1289	0.17	+2.3
1,471,236	-		Pf1N1B4_1289	0.17	-0.9
1,471,236	-		Pf1N1B4_1289	0.17	-0.8
1,471,236	-		Pf1N1B4_1289	0.17	-0.7
1,471,236	-		Pf1N1B4_1289	0.17	+1.5
1,471,241	+		Pf1N1B4_1289	0.18	-0.3
1,471,404	-		Pf1N1B4_1289	0.39	+0.0
1,471,424	+		Pf1N1B4_1289	0.42	+0.3
1,471,424	+		Pf1N1B4_1289	0.42	+0.6