Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1205

Experiment: Gentamicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.001 mg/ml
1,368,041	-		Pf1N1B4_1203	0.88	-0.0
1,368,041	-		Pf1N1B4_1203	0.88	+0.6
1,368,144	+				+0.2
1,368,157	-				-1.6
1,368,165	+				-0.6
1,368,165	+				+0.8
1,368,165	+				-1.4
1,368,166	-				-0.6
1,368,166	-				+1.6
1,368,250	+				+0.6
1,368,250	+				-0.3
1,368,251	-				-0.3
1,368,254	+				-0.0
1,368,254	+				-1.2
1,368,255	-				-1.0
1,368,255	-				+0.6
1,368,255	-				-0.0
1,368,265	+				-0.0
1,368,265	+				-1.8
1,368,265	+				-0.3
1,368,265	+				-1.6
1,368,361	+				+1.0
1,368,368	+				-0.0
1,368,368	+				-0.4
1,368,368	+				-0.4
1,368,387	+				-0.4
1,368,423	+				-0.0
1,368,423	+				+0.7
1,368,424	-				-0.0
1,368,424	-				-0.2
1,368,424	-				-0.0
1,368,524	+		Pf1N1B4_1204	0.30	+0.2
1,368,525	-		Pf1N1B4_1204	0.30	+0.3
1,368,656	+		Pf1N1B4_1204	0.65	-0.4
1,368,657	-		Pf1N1B4_1204	0.66	-0.2
1,368,657	-		Pf1N1B4_1204	0.66	+1.4
1,368,657	-		Pf1N1B4_1204	0.66	+0.1
1,368,657	-		Pf1N1B4_1204	0.66	-1.4
1,368,657	-		Pf1N1B4_1204	0.66	+2.3
1,368,657	-		Pf1N1B4_1204	0.66	-0.9
1,368,719	+		Pf1N1B4_1204	0.82	-0.9
1,368,719	+		Pf1N1B4_1204	0.82	-0.4
1,368,719	+		Pf1N1B4_1204	0.82	+0.2
1,368,720	-		Pf1N1B4_1204	0.83	+0.8
1,368,765	+				-0.5
1,368,817	+				+0.4
1,368,817	+				+1.0
1,368,817	+				-1.0
1,368,817	+				-0.6
1,368,817	+				+0.8
1,368,817	+				-1.8
1,368,818	-				-1.0
1,368,902	+				+0.6
1,368,902	+				-0.9
1,368,919	+				+1.4
1,368,939	+				+0.5
1,368,939	+				-1.0
1,368,940	-				+0.4
1,369,014	-				-0.0
1,369,102	-				-1.3
1,369,123	+				-0.6
1,369,124	-				-0.0
1,369,163	-				-0.5
1,369,163	-				+1.6
1,369,247	+		Pf1N1B4_1205	0.15	+1.6
1,369,247	+		Pf1N1B4_1205	0.15	-1.6
1,369,318	+		Pf1N1B4_1205	0.20	+0.2
1,369,318	+		Pf1N1B4_1205	0.20	+0.2
1,369,318	+		Pf1N1B4_1205	0.20	-0.6
1,369,318	+		Pf1N1B4_1205	0.20	-1.9
1,369,319	-		Pf1N1B4_1205	0.20	+0.2
1,369,406	+		Pf1N1B4_1205	0.27	-2.2
1,369,580	+		Pf1N1B4_1205	0.39	-1.0
1,369,581	-		Pf1N1B4_1205	0.39	-1.0
1,369,581	-		Pf1N1B4_1205	0.39	-0.1
1,369,814	-		Pf1N1B4_1205	0.56	-1.0
1,369,814	-		Pf1N1B4_1205	0.56	-1.2
1,370,047	+		Pf1N1B4_1205	0.73	-1.6
1,370,047	+		Pf1N1B4_1205	0.73	+1.6
1,370,047	+		Pf1N1B4_1205	0.73	-0.3
1,370,047	+		Pf1N1B4_1205	0.73	-2.0
1,370,047	+		Pf1N1B4_1205	0.73	-1.4
1,370,047	+		Pf1N1B4_1205	0.73	-1.3
1,370,048	-		Pf1N1B4_1205	0.73	-0.9
1,370,048	-				-1.0
1,370,239	+		Pf1N1B4_1205	0.87	-0.0
1,370,239	+		Pf1N1B4_1205	0.87	+1.4
1,370,239	+		Pf1N1B4_1205	0.87	-2.4
1,370,239	+		Pf1N1B4_1205	0.87	+0.4
1,370,240	-		Pf1N1B4_1205	0.87	-0.6
1,370,240	-		Pf1N1B4_1205	0.87	-1.4
1,370,240	-		Pf1N1B4_1205	0.87	-0.0
1,370,240	-		Pf1N1B4_1205	0.87	-0.9
1,370,362	+				-1.8
1,370,362	+				-0.8
1,370,363	-				-0.4
1,370,486	-		Pf1N1B4_1206	0.35	+1.0
1,370,490	-		Pf1N1B4_1206	0.36	+1.5
1,370,712	-				-1.4
1,370,784	-		Pf1N1B4_1207	0.11	-0.2
1,370,784	-		Pf1N1B4_1207	0.11	+0.2
1,370,784	-		Pf1N1B4_1207	0.11	+0.5
1,370,981	+		Pf1N1B4_1207	0.32	-0.4
1,370,981	+		Pf1N1B4_1207	0.32	-0.0
1,370,982	-				+0.4
1,371,083	+		Pf1N1B4_1207	0.44	+1.3
1,371,084	-		Pf1N1B4_1207	0.44	-0.3
1,371,266	+		Pf1N1B4_1207	0.64	+1.3
1,371,266	+		Pf1N1B4_1207	0.64	-1.2
1,371,267	-		Pf1N1B4_1207	0.64	+0.7
1,371,404	+		Pf1N1B4_1207	0.79	-0.8
1,371,404	+		Pf1N1B4_1207	0.79	+0.7
1,371,404	+		Pf1N1B4_1207	0.79	-2.5
1,371,405	-		Pf1N1B4_1207	0.79	+1.6
1,371,405	-		Pf1N1B4_1207	0.79	-0.3
1,371,405	-		Pf1N1B4_1207	0.79	+1.5