Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS17440

Experiment: Recovery broth with Tiamulin 2e-04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Tiamulin 2e-04 mM
1,692,901	+		BBR_RS17435	0.15	-1.1
1,692,924	+		BBR_RS17435	0.17	+0.7
1,692,934	-		BBR_RS17435	0.18	-0.6
1,692,944	-		BBR_RS17435	0.19	-1.5
1,692,945	-		BBR_RS17435	0.19	+0.8
1,692,974	-		BBR_RS17435	0.22	+0.6
1,692,978	+		BBR_RS17435	0.23	+0.3
1,693,069	-		BBR_RS17435	0.32	-0.6
1,693,109	+		BBR_RS17435	0.36	-1.3
1,693,116	+		BBR_RS17435	0.37	+1.5
1,693,180	+		BBR_RS17435	0.44	-0.8
1,693,180	+		BBR_RS17435	0.44	+0.2
1,693,263	-		BBR_RS17435	0.52	+1.8
1,693,279	+		BBR_RS17435	0.54	+0.3
1,693,279	+		BBR_RS17435	0.54	+0.4
1,693,287	-		BBR_RS17435	0.55	-2.2
1,693,287	-		BBR_RS17435	0.55	-0.9
1,693,287	-		BBR_RS17435	0.55	-2.1
1,693,316	-		BBR_RS17435	0.58	-0.4
1,693,321	-		BBR_RS17435	0.58	-0.2
1,693,330	-		BBR_RS17435	0.59	-0.5
1,693,374	+		BBR_RS17435	0.64	-0.7
1,693,382	-		BBR_RS17435	0.65	+0.6
1,693,384	+		BBR_RS17435	0.65	-0.0
1,693,387	-		BBR_RS17435	0.65	+0.7
1,693,387	-		BBR_RS17435	0.65	-0.8
1,693,421	-		BBR_RS17435	0.69	+1.7
1,693,439	+		BBR_RS17435	0.70	+0.1
1,693,439	+		BBR_RS17435	0.70	+1.5
1,693,476	-		BBR_RS17435	0.74	-0.6
1,693,504	+		BBR_RS17435	0.77	+1.6
1,693,531	+		BBR_RS17435	0.80	-0.4
1,693,576	+		BBR_RS17435	0.85	-0.7
1,693,582	-		BBR_RS17435	0.85	+0.3
1,693,611	-		BBR_RS17435	0.88	-1.6
1,693,619	-		BBR_RS17435	0.89	-1.1
1,693,629	+				+0.6
1,693,637	-				-1.5
1,693,712	+				-0.4
1,693,712	+				+0.5
1,693,720	-				-0.4
1,693,738	-				+0.9
1,693,784	-				-1.0
1,693,786	+				-0.1
1,693,852	-				-0.3
1,693,857	-				+1.5
1,693,903	+				-0.7
1,693,957	-				-0.3
1,693,964	+				+0.5
1,693,964	+				+1.0
1,693,972	+				+0.7
1,694,080	-		BBR_RS17440	0.20	-2.4
1,694,155	-		BBR_RS17440	0.27	-0.8
1,694,862	-				-2.4
1,694,939	-				-1.3
1,695,371	+				+0.9
1,695,371	+				-1.6
1,695,376	+				-0.5
1,695,383	+				-0.6
1,695,383	+				+0.8
1,695,392	-				+0.8
1,695,394	+				+1.0
1,695,394	+				+0.7
1,695,396	+				+0.0
1,695,450	-				+1.4
1,695,515	+				+0.8
1,695,523	-				+0.2
1,695,523	-				+0.6