Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS16425

Experiment: Recovery broth with Tiamulin 2e-04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Tiamulin 2e-04 mM
1,440,274	+				+1.8
1,440,362	-				+1.1
1,440,365	-				-0.8
1,441,179	-				-0.0
1,441,542	+		BBR_RS16425	0.25	+0.5
1,441,598	+		BBR_RS16425	0.30	-1.8
1,441,779	+		BBR_RS16425	0.47	-1.3
1,441,799	+		BBR_RS16425	0.49	-0.8
1,441,824	-		BBR_RS16425	0.51	-1.2
1,441,828	-		BBR_RS16425	0.52	-0.7
1,441,988	-		BBR_RS16425	0.67	+1.5
1,442,254	-				-0.6
1,442,369	-				-0.5
1,442,552	-				+1.1
1,442,710	-		BBR_RS16430	0.21	-0.6
1,442,832	-		BBR_RS16430	0.30	-0.3
1,442,869	-		BBR_RS16430	0.33	+2.5
1,442,993	-		BBR_RS16430	0.43	-0.5
1,443,088	+		BBR_RS16430	0.50	-0.7
1,443,130	-		BBR_RS16430	0.54	-0.6