Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS15180

Experiment: Recovery broth with Tiamulin 2e-04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Tiamulin 2e-04 mM
1,172,920	-				-0.8
1,172,950	-				-1.1
1,173,166	-		BBR_RS15180	0.14	-0.2
1,173,194	-		BBR_RS15180	0.15	+0.5
1,173,199	-		BBR_RS15180	0.15	-0.0
1,173,266	-		BBR_RS15180	0.19	-2.4
1,173,331	-		BBR_RS15180	0.22	-0.8
1,173,454	-		BBR_RS15180	0.28	-0.4
1,173,563	-		BBR_RS15180	0.33	-0.1
1,173,575	+		BBR_RS15180	0.34	-0.1
1,173,734	-		BBR_RS15180	0.42	-0.6
1,173,741	-		BBR_RS15180	0.42	+1.3
1,173,741	-		BBR_RS15180	0.42	-0.7
1,173,753	-		BBR_RS15180	0.43	-0.5
1,173,755	-		BBR_RS15180	0.43	+0.0
1,173,776	-		BBR_RS15180	0.44	-2.3
1,174,036	-		BBR_RS15180	0.56	-0.2
1,174,079	-		BBR_RS15180	0.59	-1.2
1,174,103	-		BBR_RS15180	0.60	-1.4
1,174,149	-		BBR_RS15180	0.62	-1.1
1,174,149	-		BBR_RS15180	0.62	+0.2
1,174,149	-		BBR_RS15180	0.62	-0.2
1,174,159	-		BBR_RS15180	0.63	-0.7
1,174,226	+		BBR_RS15180	0.66	-0.2
1,174,228	-		BBR_RS15180	0.66	-0.4
1,174,244	-		BBR_RS15180	0.67	-1.9
1,174,432	-		BBR_RS15180	0.76	-1.6
1,174,453	+		BBR_RS15180	0.77	+0.0
1,174,515	-		BBR_RS15180	0.80	-0.1
1,174,518	-		BBR_RS15180	0.80	-2.1
1,174,518	-		BBR_RS15180	0.80	-2.1
1,174,593	-		BBR_RS15180	0.84	-0.5
1,174,610	-		BBR_RS15180	0.85	+0.3
1,174,657	-		BBR_RS15180	0.87	+0.8
1,174,688	-		BBR_RS15180	0.89	-0.1
1,174,836	-				-0.7
1,174,904	+				+0.5
1,174,977	-				+0.4
1,175,048	+				+0.7
1,175,139	+				-0.9
1,175,139	+				-0.7
1,175,147	-				-0.4
1,175,152	-				-1.1
1,175,342	+				+0.0
1,175,427	-				-0.7
1,175,523	+		BBR_RS15185	0.18	-0.7
1,175,579	+		BBR_RS15185	0.23	-0.6
1,175,585	+		BBR_RS15185	0.23	+0.9
1,175,585	+		BBR_RS15185	0.23	-0.3
1,175,598	-		BBR_RS15185	0.24	-1.1
1,175,604	-		BBR_RS15185	0.25	+0.7
1,175,623	+		BBR_RS15185	0.27	-0.1
1,175,636	+		BBR_RS15185	0.28	-0.7
1,175,660	+		BBR_RS15185	0.30	+0.5
1,175,660	+		BBR_RS15185	0.30	-0.7
1,175,677	-		BBR_RS15185	0.31	+0.6
1,175,724	+		BBR_RS15185	0.35	+1.0
1,175,749	-		BBR_RS15185	0.37	+0.8
1,175,813	-		BBR_RS15185	0.43	+0.8
1,175,838	+		BBR_RS15185	0.45	+0.2
1,175,845	-		BBR_RS15185	0.46	+1.0
1,175,850	-		BBR_RS15185	0.46	-0.5
1,175,917	+		BBR_RS15185	0.52	-0.4
1,175,917	-		BBR_RS15185	0.52	+0.8