Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS15070

Experiment: Recovery broth with Tiamulin 2e-04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Tiamulin 2e-04 mM
1,149,011	+				-0.4
1,149,036	+				-1.6
1,149,036	+				+0.2
1,149,041	+				-0.5
1,149,041	+				-0.1
1,149,472	+				-1.4
1,149,472	+				-0.1
1,149,472	+				-0.5
1,149,662	-		BBR_RS15070	0.13	-1.5
1,149,671	+		BBR_RS15070	0.13	+0.5
1,150,082	-		BBR_RS15070	0.48	-1.7
1,150,087	-		BBR_RS15070	0.48	+1.8
1,150,162	-		BBR_RS15070	0.55	-0.8
1,150,218	+		BBR_RS15070	0.60	-1.6
1,150,301	-		BBR_RS15070	0.66	-0.7
1,150,361	-		BBR_RS15070	0.72	+0.3
1,150,386	+		BBR_RS15070	0.74	-1.5
1,150,482	+		BBR_RS15070	0.82	-0.3
1,150,600	+				-0.5
1,150,690	+				-0.0
1,150,698	+				-0.5
1,150,716	+				-1.6
1,150,716	+				+0.1
1,150,719	-				-0.3
1,150,726	+				+0.3
1,150,747	-				+0.9
1,150,755	+				-0.5
1,150,764	-				+0.9
1,150,765	-				-0.5
1,150,790	-				+0.4
1,150,896	+		BBR_RS15075	0.21	-0.2
1,150,904	-		BBR_RS15075	0.22	+0.8
1,150,928	+		BBR_RS15075	0.27	-0.3
1,150,940	+		BBR_RS15075	0.30	+0.8
1,150,948	-		BBR_RS15075	0.32	-0.5
1,150,972	-		BBR_RS15075	0.37	+0.9
1,150,972	-		BBR_RS15075	0.37	-0.2
1,150,996	+		BBR_RS15075	0.42	+0.8
1,151,067	+		BBR_RS15075	0.57	-1.1
1,151,085	-		BBR_RS15075	0.61	+0.8
1,151,085	-		BBR_RS15075	0.61	-0.0
1,151,094	-		BBR_RS15075	0.62	+0.7
1,151,095	-		BBR_RS15075	0.63	+0.8
1,151,097	-		BBR_RS15075	0.63	+0.0
1,151,101	+		BBR_RS15075	0.64	+0.9
1,151,107	-		BBR_RS15075	0.65	-0.7
1,151,107	-		BBR_RS15075	0.65	-0.2
1,151,107	-		BBR_RS15075	0.65	+0.5
1,151,107	-		BBR_RS15075	0.65	-0.1
1,151,133	+		BBR_RS15075	0.71	-0.5
1,151,187	-		BBR_RS15075	0.82	-0.3
1,151,193	+		BBR_RS15075	0.83	-0.2
1,151,193	+		BBR_RS15075	0.83	-0.5
1,151,206	-		BBR_RS15075	0.86	-0.7
1,151,229	-				+0.4
1,151,229	-				-1.2
1,151,234	-				+0.5
1,151,234	-				+1.2
1,151,234	-				-0.2
1,151,262	-				+0.3
1,151,279	+				-3.1
1,151,435	+				-1.2