Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS14715

Experiment: Recovery broth with Tiamulin 2e-04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Tiamulin 2e-04 mM
1,074,751	+		BBR_RS14710	0.47	+1.1
1,074,859	-		BBR_RS14710	0.55	-0.5
1,074,896	-		BBR_RS14710	0.58	+1.1
1,074,917	-		BBR_RS14710	0.60	-0.3
1,075,196	+		BBR_RS14710	0.82	-0.4
1,075,252	+		BBR_RS14710	0.86	-0.1
1,075,363	-				-0.1
1,075,385	+				-0.2
1,075,464	-				+0.1
1,075,471	+				-0.2
1,075,517	-				-0.8
1,075,798	-		BBR_RS14715	0.62	-1.0
1,075,809	+		BBR_RS14715	0.68	-0.3
1,075,853	+				+0.1
1,075,915	-				+0.0
1,075,966	+				-0.2
1,076,010	+				-0.5
1,076,047	+				-0.2
1,076,085	-				-0.5
1,076,102	-				+0.1
1,076,102	-				-1.5
1,076,117	+				+0.1
1,076,140	+				+0.9
1,076,226	+		BBR_RS14720	0.14	-0.2
1,076,268	-		BBR_RS14720	0.17	+1.0
1,076,268	-		BBR_RS14720	0.17	-0.9
1,076,294	-		BBR_RS14720	0.19	-0.3
1,076,368	-		BBR_RS14720	0.25	-1.0
1,076,486	+		BBR_RS14720	0.34	-0.9
1,076,486	+		BBR_RS14720	0.34	+0.8
1,076,493	+		BBR_RS14720	0.35	+0.2
1,076,494	-		BBR_RS14720	0.35	-1.2
1,076,494	-		BBR_RS14720	0.35	-0.2
1,076,514	+		BBR_RS14720	0.37	+0.2
1,076,514	+		BBR_RS14720	0.37	+0.3
1,076,514	+		BBR_RS14720	0.37	+1.0
1,076,514	+		BBR_RS14720	0.37	-0.1
1,076,522	-		BBR_RS14720	0.37	-0.2
1,076,531	-		BBR_RS14720	0.38	-0.2
1,076,541	-		BBR_RS14720	0.39	-0.4
1,076,560	-		BBR_RS14720	0.40	-2.2
1,076,560	-		BBR_RS14720	0.40	+0.6
1,076,575	-		BBR_RS14720	0.41	-0.2
1,076,597	-		BBR_RS14720	0.43	+1.3
1,076,821	+		BBR_RS14720	0.61	+1.1