Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS12590

Experiment: Recovery broth with Tiamulin 2e-04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Tiamulin 2e-04 mM
581,428	+				+2.2
581,494	+				+0.0
581,494	+				+1.4
581,501	+				+0.9
581,502	-				-0.9
581,502	-				-0.9
581,509	-				+1.1
581,509	-				+0.2
581,509	-				+1.7
581,509	-				-0.0
581,509	-				-0.4
581,509	-				-0.1
581,582	-				-1.3
581,804	-		BBR_RS12590	0.33	-1.0
581,804	-		BBR_RS12590	0.33	-0.8
581,927	-		BBR_RS12590	0.47	+0.5
581,952	-		BBR_RS12590	0.50	-1.4
582,206	-		BBR_RS12590	0.79	-1.3
582,242	-		BBR_RS12590	0.83	-0.5
582,340	-				-2.1
582,350	-				-1.2
582,432	-				+1.3
582,477	-				+1.0
582,562	+		BBR_RS12595	0.14	+1.3