Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS11540

Experiment: Recovery broth with Tiamulin 2e-04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Tiamulin 2e-04 mM
348,479	+		BBR_RS11540	0.45	+0.3
348,485	+		BBR_RS11540	0.45	-1.2
348,581	+		BBR_RS11540	0.52	-0.7
348,581	+		BBR_RS11540	0.52	-0.9
348,587	+		BBR_RS11540	0.52	-2.4
349,219	-				+0.7
349,221	+				+0.2
349,221	+				+0.2
349,221	+				-0.2
349,221	+				-0.3
349,221	+				+1.3
349,221	+				-0.7
349,229	-				-1.6
349,229	-				-0.6
349,262	+				+0.6
349,262	+				+1.7
349,272	-				+0.1
349,272	-				+0.3
349,277	-				+0.6
349,277	-				-1.1
349,308	+				+0.5
349,317	-				+0.3
349,335	+				+0.2
349,340	+				+0.6
349,348	-				+0.5
349,365	+				-0.1
349,372	+				-0.9
350,108	-				-0.0
350,108	-				+0.4
350,131	+				+0.1
350,142	+				+0.5
350,143	+				+0.6
350,148	+				-0.6
350,150	-				+0.4
350,151	-				-0.7
350,153	+				+0.6
350,153	+				-0.2
350,153	+				-0.0
350,153	+				-0.8
350,161	-				+0.5
350,161	-				+0.3
350,161	-				+0.7
350,161	-				+0.1
350,192	+				+0.1
350,197	+				+0.4
350,199	+				-0.8
350,216	+				-0.0
350,221	+				-1.4
350,229	-				+0.1
350,236	+				+0.3
350,239	-				+0.2
350,239	-				+0.0
350,261	+				-0.4