Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS10625

Experiment: Recovery broth with Tiamulin 2e-04 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Tiamulin 2e-04 mM
102,763	-				-0.5
102,808	-		BBR_RS10625	0.12	-1.5
102,808	-		BBR_RS10625	0.12	-0.9
102,810	-		BBR_RS10625	0.12	-1.4
102,860	-		BBR_RS10625	0.22	+1.5
103,275	-				+0.4
103,275	-				-0.9
103,275	-				-0.4
103,275	-				-0.2
103,275	-				+0.0
103,275	-				+0.2
103,275	-				-0.9
103,307	-				-1.2
103,307	-				-2.3
103,307	-				-1.9
103,312	-				-0.9
103,332	-				-2.3
103,337	-				-1.8
104,032	-				+0.2
104,039	+				+0.4
104,039	+				+0.2
104,047	-				-0.3
104,047	-				-1.1
104,050	-				-0.1
104,055	+				-0.3
104,061	+				+1.0
104,069	-				+0.1
104,109	+				-1.3
104,128	-				+0.7
104,128	-				-1.5
104,141	+				-1.3
104,143	+				+0.2
104,146	+				-0.3
104,146	+				+0.0
104,151	+				-1.4
104,151	-				-0.2
104,171	+				-0.6
104,171	+				+1.0
104,181	+				-0.1
104,181	+				-0.9
104,183	+				+0.5
104,186	+				-1.1
104,189	-				+0.0
104,189	-				-0.3
104,193	+				+1.0
104,193	+				-1.6
104,193	+				-0.4
104,193	+				+0.1
104,194	-				+0.3
104,194	-				-0.1
104,194	-				-0.6
104,201	-				-0.2
104,201	-				+0.3
104,201	-				+0.5
104,201	-				-0.1
104,212	+				+0.4
104,235	+				-1.0
104,235	+				-0.4
104,237	+				-0.9
104,237	+				+0.3
104,237	+				-0.9
104,237	+				+0.2
104,237	+				+0.0
104,237	+				-0.0
104,245	+				-0.2
104,245	-				+0.1
104,245	-				-0.4
104,245	-				-1.6
104,245	-				-0.3
104,246	-				-0.7
104,263	-				+1.0
104,263	-				-0.2
104,263	-				-0.3