Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12730

Experiment: Nalidixic 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.04 mg/ml
2,852,098	-				-1.6
2,852,098	-				-0.2
2,852,127	+				-0.6
2,852,184	+				-0.0
2,852,184	+				+0.1
2,852,184	+				-0.4
2,852,184	+				+0.5
2,852,184	+				+0.1
2,852,184	+				-0.0
2,852,184	+				-0.1
2,852,185	-				-0.7
2,852,185	-				+0.0
2,852,185	-				-0.2
2,852,185	-				+0.3
2,852,185	-				-0.7
2,852,185	-				+0.2
2,852,220	+				+1.5
2,852,221	-				-0.5
2,852,221	-				+0.9
2,852,222	+				+0.1
2,852,222	+				+0.1
2,852,222	+				+0.1
2,852,222	+				-0.4
2,852,223	-				+0.3
2,852,223	-				+0.1
2,852,223	-				+0.4
2,852,223	-				-0.5
2,852,223	-				-0.0
2,852,263	-				+0.9
2,852,382	+		ABZR86_RS12725	0.16	-0.1
2,852,400	+		ABZR86_RS12725	0.18	+0.6
2,852,401	-		ABZR86_RS12725	0.18	-0.3
2,852,401	-		ABZR86_RS12725	0.18	+0.1
2,852,401	-		ABZR86_RS12725	0.18	-0.3
2,852,401	-		ABZR86_RS12725	0.18	+0.7
2,852,401	-		ABZR86_RS12725	0.18	-0.7
2,852,401	-		ABZR86_RS12725	0.18	-0.3
2,852,401	-		ABZR86_RS12725	0.18	-0.6
2,852,430	+		ABZR86_RS12725	0.23	+0.5
2,852,431	-		ABZR86_RS12725	0.23	-0.7
2,852,472	+		ABZR86_RS12725	0.29	+0.6
2,852,472	+		ABZR86_RS12725	0.29	+0.8
2,852,473	-		ABZR86_RS12725	0.29	+0.3
2,852,590	-		ABZR86_RS12725	0.47	-3.2
2,852,590	-		ABZR86_RS12725	0.47	-0.4
2,852,590	-		ABZR86_RS12725	0.47	+0.9
2,852,601	+		ABZR86_RS12725	0.49	-0.6
2,852,604	+		ABZR86_RS12725	0.49	-0.5
2,852,605	-		ABZR86_RS12725	0.49	+0.0
2,852,605	-		ABZR86_RS12725	0.49	+0.3
2,852,677	-		ABZR86_RS12725	0.60	-2.0
2,852,709	+		ABZR86_RS12725	0.65	-0.9
2,852,709	+		ABZR86_RS12725	0.65	-0.1
2,852,710	-		ABZR86_RS12725	0.65	-0.7
2,852,710	-		ABZR86_RS12725	0.65	-0.4
2,852,712	+		ABZR86_RS12725	0.66	+0.3
2,852,712	+		ABZR86_RS12725	0.66	+0.7
2,852,713	-		ABZR86_RS12725	0.66	+0.2
2,852,713	-		ABZR86_RS12725	0.66	+0.3
2,852,713	-		ABZR86_RS12725	0.66	+0.2
2,852,853	+		ABZR86_RS12725	0.87	-0.3
2,852,970	+				-0.9
2,852,971	-				+0.5
2,852,971	-				+0.2
2,853,157	+		ABZR86_RS12730	0.11	+0.6
2,853,167	-		ABZR86_RS12730	0.12	-0.6
2,853,319	+		ABZR86_RS12730	0.31	-0.5
2,853,390	+		ABZR86_RS12730	0.40	+0.0
2,853,391	-		ABZR86_RS12730	0.40	+0.3
2,853,440	-		ABZR86_RS12730	0.46	-0.3
2,853,440	-		ABZR86_RS12730	0.46	+0.4
2,854,047	+		ABZR86_RS12735	0.42	+0.3
2,854,047	+		ABZR86_RS12735	0.42	+0.6
2,854,048	-		ABZR86_RS12735	0.43	+0.2
2,854,048	-		ABZR86_RS12735	0.43	-0.7
2,854,048	-		ABZR86_RS12735	0.43	-0.3
2,854,155	+		ABZR86_RS12735	0.68	+1.6
2,854,156	-		ABZR86_RS12735	0.69	+0.9
2,854,156	-		ABZR86_RS12735	0.69	-0.1
2,854,156	-		ABZR86_RS12735	0.69	+0.4
2,854,156	-		ABZR86_RS12735	0.69	+0.3
2,854,199	-				+0.2
2,854,199	-				+0.1
2,854,285	-				+0.4
2,854,356	+				-0.3
2,854,357	-				+0.0
2,854,357	-				-0.8
2,854,357	-				+0.1
2,854,357	-				-0.4
2,854,357	-				+0.0
2,854,423	+		ABZR86_RS12740	0.14	+0.1
2,854,424	-		ABZR86_RS12740	0.14	-0.3
2,854,669	+		ABZR86_RS12740	0.29	+1.0
2,854,669	+		ABZR86_RS12740	0.29	+0.1
2,854,669	+		ABZR86_RS12740	0.29	+0.3
2,854,670	-		ABZR86_RS12740	0.29	+0.3
2,854,670	-		ABZR86_RS12740	0.29	-0.3