Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12160

Experiment: Nalidixic 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.04 mg/ml
2,716,844	-				+0.1
2,716,856	-				-0.2
2,716,862	+				+0.8
2,716,863	-				-0.0
2,716,946	+				+0.3
2,716,946	+				+0.5
2,716,946	+				-0.3
2,716,946	+				-0.0
2,716,947	-				+0.5
2,716,947	-				-0.9
2,716,972	+				-0.0
2,716,972	+				-0.1
2,716,973	-				+0.3
2,717,020	+				-0.5
2,717,093	+				-0.2
2,717,684	-				-1.2
2,717,684	-				-0.5
2,717,684	-				-1.6
2,717,684	-				-1.0
2,717,712	-				+0.1
2,717,752	+				+1.1
2,717,752	+				+0.1
2,717,753	-				+0.5
2,717,760	+				-0.3
2,717,760	+				-0.2
2,717,761	-				+0.9
2,717,761	-				-0.0
2,717,790	+				-1.7
2,717,790	+				-0.6
2,717,790	+				+0.5
2,717,790	+				-0.5
2,717,791	-				+0.1
2,718,060	+		ABZR86_RS12160	0.25	-0.6
2,718,066	+		ABZR86_RS12160	0.26	+0.3
2,718,066	+		ABZR86_RS12160	0.26	+0.2
2,718,066	+		ABZR86_RS12160	0.26	+1.7
2,718,067	-		ABZR86_RS12160	0.26	-1.4
2,718,067	-		ABZR86_RS12160	0.26	+0.4
2,718,067	-		ABZR86_RS12160	0.26	+0.0
2,718,067	-		ABZR86_RS12160	0.26	-0.1
2,718,090	+		ABZR86_RS12160	0.27	+0.5
2,718,090	+		ABZR86_RS12160	0.27	-0.1
2,718,090	+		ABZR86_RS12160	0.27	-0.1
2,718,090	+		ABZR86_RS12160	0.27	-0.4
2,718,090	+		ABZR86_RS12160	0.27	+0.3
2,718,091	-		ABZR86_RS12160	0.27	+0.2
2,718,091	-		ABZR86_RS12160	0.27	-0.1
2,718,091	-		ABZR86_RS12160	0.27	-0.5
2,718,091	-		ABZR86_RS12160	0.27	+0.0
2,718,249	+		ABZR86_RS12160	0.38	+0.5
2,718,249	+		ABZR86_RS12160	0.38	+0.6
2,718,249	+		ABZR86_RS12160	0.38	-0.6
2,718,249	+		ABZR86_RS12160	0.38	-1.8
2,718,255	+		ABZR86_RS12160	0.39	-0.3
2,718,255	+		ABZR86_RS12160	0.39	-0.5
2,718,255	+		ABZR86_RS12160	0.39	+0.3
2,718,255	+		ABZR86_RS12160	0.39	-0.1
2,718,256	-		ABZR86_RS12160	0.39	-1.1
2,718,288	+		ABZR86_RS12160	0.41	+0.0
2,718,289	-		ABZR86_RS12160	0.41	+0.2
2,718,289	-		ABZR86_RS12160	0.41	+0.0
2,718,289	-		ABZR86_RS12160	0.41	-0.4
2,718,544	-		ABZR86_RS12160	0.59	-0.3
2,718,591	+		ABZR86_RS12160	0.62	-0.5
2,718,592	-		ABZR86_RS12160	0.62	+0.5
2,718,618	+		ABZR86_RS12160	0.64	+0.1
2,718,619	-		ABZR86_RS12160	0.64	+0.2
2,718,619	-		ABZR86_RS12160	0.64	+0.0
2,718,733	-		ABZR86_RS12160	0.72	+0.6
2,718,822	+		ABZR86_RS12160	0.78	-0.1
2,718,823	-		ABZR86_RS12160	0.78	+0.2
2,718,823	-		ABZR86_RS12160	0.78	-0.2
2,719,116	-				+1.2
2,719,162	-				+0.2
2,719,494	+		ABZR86_RS12165	0.62	+0.9
2,719,494	+		ABZR86_RS12165	0.62	-0.6
2,719,540	+		ABZR86_RS12165	0.70	+0.8
2,719,540	+		ABZR86_RS12165	0.70	+0.3
2,719,540	+		ABZR86_RS12165	0.70	-1.1
2,719,542	+		ABZR86_RS12165	0.70	-0.5
2,719,543	-		ABZR86_RS12165	0.70	+0.6
2,719,543	-		ABZR86_RS12165	0.70	+0.1
2,719,543	-		ABZR86_RS12165	0.70	+0.2
2,719,543	-		ABZR86_RS12165	0.70	-0.6
2,719,543	-		ABZR86_RS12165	0.70	-0.5
2,719,708	+				-0.7
2,719,721	-				-0.3
2,719,721	-				+0.0
2,719,721	-				+0.3
2,719,726	+				-0.6
2,719,726	+				-0.7
2,719,726	+				+0.6
2,719,727	-				+0.7
2,719,727	-				+0.2
2,719,809	+				-0.4
2,719,809	+				-0.4
2,719,810	-				+0.8
2,719,880	+				+0.7
2,719,880	+				+0.8
2,719,880	+				-0.3
2,719,880	+				-0.2
2,719,881	-				-0.4
2,719,881	-				+0.3
2,719,888	-				-1.1
2,719,888	-				-0.4
2,719,923	+				+0.4
2,719,923	+				-0.4
2,720,059	-		ABZR86_RS12170	0.26	-0.1