Experiment: Nalidixic 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03295 and ABZR86_RS03300 are separated by 1 nucleotides ABZR86_RS03300 and ABZR86_RS03305 are separated by 67 nucleotides
ABZR86_RS03295: ABZR86_RS03295 - DUF4255 domain-containing protein, at 693,306 to 693,962
_RS03295
ABZR86_RS03300: ABZR86_RS03300 - hypothetical protein, at 693,964 to 694,983
_RS03300
ABZR86_RS03305: ABZR86_RS03305 - phage tail sheath C-terminal domain-containing protein, at 695,051 to 696,439
_RS03305
Position (kb) 693
694
695 Strain fitness (log2 ratio) -1
0
1 at 693.175 kb on + strand at 693.175 kb on + strand at 693.176 kb on - strand at 693.367 kb on - strand at 693.615 kb on + strand, within ABZR86_RS03295 at 693.616 kb on - strand, within ABZR86_RS03295 at 693.772 kb on - strand, within ABZR86_RS03295 at 693.843 kb on + strand, within ABZR86_RS03295 at 693.844 kb on - strand, within ABZR86_RS03295 at 693.921 kb on - strand at 693.989 kb on - strand at 693.989 kb on - strand at 694.024 kb on + strand at 694.024 kb on + strand at 694.282 kb on + strand, within ABZR86_RS03300 at 694.282 kb on + strand, within ABZR86_RS03300 at 694.712 kb on + strand, within ABZR86_RS03300 at 694.820 kb on - strand, within ABZR86_RS03300 at 694.975 kb on + strand at 694.976 kb on - strand at 694.976 kb on - strand at 694.981 kb on + strand at 694.981 kb on + strand at 694.981 kb on + strand at 694.982 kb on - strand at 695.044 kb on - strand at 695.057 kb on + strand at 695.075 kb on + strand at 695.352 kb on - strand, within ABZR86_RS03305 at 695.366 kb on + strand, within ABZR86_RS03305 at 695.393 kb on + strand, within ABZR86_RS03305 at 695.393 kb on + strand, within ABZR86_RS03305 at 695.394 kb on - strand, within ABZR86_RS03305 at 695.414 kb on + strand, within ABZR86_RS03305 at 695.414 kb on + strand, within ABZR86_RS03305 at 695.507 kb on + strand, within ABZR86_RS03305 at 695.508 kb on - strand, within ABZR86_RS03305 at 695.508 kb on - strand, within ABZR86_RS03305 at 695.823 kb on - strand, within ABZR86_RS03305 at 695.823 kb on - strand, within ABZR86_RS03305 at 695.943 kb on - strand, within ABZR86_RS03305 at 695.943 kb on - strand, within ABZR86_RS03305
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.04 mg/ml remove 693,175 + +0.7 693,175 + -0.7 693,176 - -1.6 693,367 - -0.0 693,615 + ABZR86_RS03295 0.47 +0.4 693,616 - ABZR86_RS03295 0.47 +0.1 693,772 - ABZR86_RS03295 0.71 -0.3 693,843 + ABZR86_RS03295 0.82 -0.3 693,844 - ABZR86_RS03295 0.82 -1.1 693,921 - +0.3 693,989 - -0.1 693,989 - +0.1 694,024 + +0.5 694,024 + -0.7 694,282 + ABZR86_RS03300 0.31 +0.5 694,282 + ABZR86_RS03300 0.31 -0.1 694,712 + ABZR86_RS03300 0.73 -1.1 694,820 - ABZR86_RS03300 0.84 +0.5 694,975 + -0.2 694,976 - -0.3 694,976 - -0.4 694,981 + -0.6 694,981 + +0.6 694,981 + -0.7 694,982 - +0.2 695,044 - +0.6 695,057 + -0.2 695,075 + -0.2 695,352 - ABZR86_RS03305 0.22 -0.7 695,366 + ABZR86_RS03305 0.23 -0.3 695,393 + ABZR86_RS03305 0.25 -0.4 695,393 + ABZR86_RS03305 0.25 -1.1 695,394 - ABZR86_RS03305 0.25 -0.4 695,414 + ABZR86_RS03305 0.26 -0.5 695,414 + ABZR86_RS03305 0.26 +0.4 695,507 + ABZR86_RS03305 0.33 -0.8 695,508 - ABZR86_RS03305 0.33 +0.5 695,508 - ABZR86_RS03305 0.33 -0.7 695,823 - ABZR86_RS03305 0.56 +0.4 695,823 - ABZR86_RS03305 0.56 -0.0 695,943 - ABZR86_RS03305 0.64 +0.5 695,943 - ABZR86_RS03305 0.64 +0.3
Or see this region's nucleotide sequence