Experiment: Nalidixic 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02820 and ABZR86_RS02825 are separated by 42 nucleotides ABZR86_RS02825 and ABZR86_RS02830 are separated by 59 nucleotides ABZR86_RS02830 and ABZR86_RS02835 are separated by 53 nucleotides
ABZR86_RS02820: ABZR86_RS02820 - peptide chain release factor 2, at 570,041 to 571,166
_RS02820
ABZR86_RS02825: ABZR86_RS02825 - hypothetical protein, at 571,209 to 571,631
_RS02825
ABZR86_RS02830: ABZR86_RS02830 - hypothetical protein, at 571,691 to 572,806
_RS02830
ABZR86_RS02835: ABZR86_RS02835 - lysine--tRNA ligase, at 572,860 to 574,380
_RS02835
Position (kb) 571
572
573 Strain fitness (log2 ratio) -1
0
1
2 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.838 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.853 kb on + strand, within ABZR86_RS02830 at 571.898 kb on + strand, within ABZR86_RS02830 at 571.898 kb on + strand, within ABZR86_RS02830 at 571.919 kb on + strand, within ABZR86_RS02830 at 571.990 kb on + strand, within ABZR86_RS02830 at 572.276 kb on + strand, within ABZR86_RS02830 at 572.276 kb on + strand, within ABZR86_RS02830 at 572.276 kb on + strand, within ABZR86_RS02830 at 572.294 kb on + strand, within ABZR86_RS02830 at 572.294 kb on + strand, within ABZR86_RS02830 at 572.294 kb on + strand, within ABZR86_RS02830 at 572.357 kb on + strand, within ABZR86_RS02830 at 572.357 kb on + strand, within ABZR86_RS02830 at 572.381 kb on + strand, within ABZR86_RS02830 at 572.381 kb on + strand, within ABZR86_RS02830 at 572.381 kb on + strand, within ABZR86_RS02830 at 572.408 kb on + strand, within ABZR86_RS02830 at 572.492 kb on + strand, within ABZR86_RS02830 at 572.675 kb on + strand, within ABZR86_RS02830 at 572.675 kb on + strand, within ABZR86_RS02830 at 572.696 kb on + strand at 572.696 kb on + strand at 572.696 kb on + strand at 572.708 kb on + strand at 572.708 kb on + strand at 572.793 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.04 mg/ml remove 571,838 + ABZR86_RS02830 0.13 +2.0 571,838 + ABZR86_RS02830 0.13 -0.6 571,838 + ABZR86_RS02830 0.13 +1.4 571,838 + ABZR86_RS02830 0.13 +2.3 571,838 + ABZR86_RS02830 0.13 -0.5 571,853 + ABZR86_RS02830 0.15 +0.1 571,853 + ABZR86_RS02830 0.15 +0.2 571,853 + ABZR86_RS02830 0.15 -0.3 571,853 + ABZR86_RS02830 0.15 +0.9 571,898 + ABZR86_RS02830 0.19 +0.5 571,898 + ABZR86_RS02830 0.19 -0.2 571,919 + ABZR86_RS02830 0.20 +0.3 571,990 + ABZR86_RS02830 0.27 +1.9 572,276 + ABZR86_RS02830 0.52 +0.0 572,276 + ABZR86_RS02830 0.52 -0.4 572,276 + ABZR86_RS02830 0.52 +0.1 572,294 + ABZR86_RS02830 0.54 -1.1 572,294 + ABZR86_RS02830 0.54 +0.9 572,294 + ABZR86_RS02830 0.54 +0.6 572,357 + ABZR86_RS02830 0.60 +0.4 572,357 + ABZR86_RS02830 0.60 -1.0 572,381 + ABZR86_RS02830 0.62 +0.2 572,381 + ABZR86_RS02830 0.62 -1.4 572,381 + ABZR86_RS02830 0.62 -0.5 572,408 + ABZR86_RS02830 0.64 -0.7 572,492 + ABZR86_RS02830 0.72 -0.2 572,675 + ABZR86_RS02830 0.88 -1.0 572,675 + ABZR86_RS02830 0.88 -0.8 572,696 + +0.6 572,696 + +0.0 572,696 + +0.8 572,708 + +0.9 572,708 + -1.1 572,793 + +0.3
Or see this region's nucleotide sequence