Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2491

Experiment: Polymyxin B sulfate 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.2 mg/ml
2,570,020	-				-1.3
2,570,043	-				-3.3
2,570,083	+	miaA	Synpcc7942_2490	0.13	-2.5
2,570,083	-	miaA	Synpcc7942_2490	0.13	-2.3
2,570,091	-	miaA	Synpcc7942_2490	0.14	-4.1
2,570,098	-	miaA	Synpcc7942_2490	0.15	-1.0
2,570,107	+	miaA	Synpcc7942_2490	0.16	-2.3
2,570,133	-	miaA	Synpcc7942_2490	0.18	-1.3
2,570,175	-	miaA	Synpcc7942_2490	0.23	-4.5
2,570,181	+	miaA	Synpcc7942_2490	0.24	-2.3
2,570,181	+	miaA	Synpcc7942_2490	0.24	-3.3
2,570,181	+	miaA	Synpcc7942_2490	0.24	-3.3
2,570,181	-	miaA	Synpcc7942_2490	0.24	-1.6
2,570,182	-	miaA	Synpcc7942_2490	0.24	-2.9
2,570,182	-	miaA	Synpcc7942_2490	0.24	-3.3
2,570,189	-	miaA	Synpcc7942_2490	0.24	-1.3
2,570,189	-	miaA	Synpcc7942_2490	0.24	-2.5
2,570,189	-	miaA	Synpcc7942_2490	0.24	-2.3
2,570,189	-	miaA	Synpcc7942_2490	0.24	-3.6
2,570,189	-	miaA	Synpcc7942_2490	0.24	-0.3
2,570,222	+	miaA	Synpcc7942_2490	0.28	-3.6
2,570,222	+	miaA	Synpcc7942_2490	0.28	-2.7
2,570,224	-	miaA	Synpcc7942_2490	0.28	-1.5
2,570,224	-	miaA	Synpcc7942_2490	0.28	-3.6
2,570,230	-	miaA	Synpcc7942_2490	0.29	-2.6
2,570,237	+	miaA	Synpcc7942_2490	0.30	-1.6
2,570,265	-	miaA	Synpcc7942_2490	0.33	-2.9
2,570,308	-	miaA	Synpcc7942_2490	0.37	-3.6
2,570,341	+	miaA	Synpcc7942_2490	0.41	-0.8
2,570,383	+	miaA	Synpcc7942_2490	0.45	-4.1
2,570,391	-	miaA	Synpcc7942_2490	0.46	-1.3
2,570,391	-	miaA	Synpcc7942_2490	0.46	-1.9
2,570,391	-	miaA	Synpcc7942_2490	0.46	-4.2
2,570,391	-	miaA	Synpcc7942_2490	0.46	-0.7
2,570,408	-	miaA	Synpcc7942_2490	0.48	-1.3
2,570,443	+	miaA	Synpcc7942_2490	0.52	-4.9
2,570,443	+	miaA	Synpcc7942_2490	0.52	-2.3
2,570,463	-	miaA	Synpcc7942_2490	0.54	-4.5
2,570,463	-	miaA	Synpcc7942_2490	0.54	-4.1
2,570,463	-	miaA	Synpcc7942_2490	0.54	-2.0
2,570,469	-	miaA	Synpcc7942_2490	0.55	-2.6
2,570,479	+	miaA	Synpcc7942_2490	0.56	-1.3
2,570,533	+	miaA	Synpcc7942_2490	0.62	-3.9
2,570,533	+	miaA	Synpcc7942_2490	0.62	-2.5
2,570,542	-	miaA	Synpcc7942_2490	0.63	-4.7
2,570,542	-	miaA	Synpcc7942_2490	0.63	-1.3
2,570,542	-	miaA	Synpcc7942_2490	0.63	-2.3
2,570,566	+	miaA	Synpcc7942_2490	0.65	-2.9
2,570,566	-	miaA	Synpcc7942_2490	0.65	-3.3
2,570,566	-	miaA	Synpcc7942_2490	0.65	-1.9
2,570,568	+	miaA	Synpcc7942_2490	0.66	-1.9
2,570,568	+	miaA	Synpcc7942_2490	0.66	-0.3
2,570,568	+	miaA	Synpcc7942_2490	0.66	-2.9
2,570,576	-	miaA	Synpcc7942_2490	0.66	-1.6
2,570,576	-	miaA	Synpcc7942_2490	0.66	-3.6
2,570,653	-	miaA	Synpcc7942_2490	0.75	-2.9
2,570,721	-	miaA	Synpcc7942_2490	0.82	-0.4
2,570,726	-	miaA	Synpcc7942_2490	0.83	-1.3
2,570,731	-	miaA	Synpcc7942_2490	0.83	-4.5
2,570,748	-	miaA	Synpcc7942_2490	0.85	-2.3
2,570,779	+	miaA	Synpcc7942_2490	0.88	-1.7
2,570,787	-	miaA	Synpcc7942_2490	0.89	-2.9
2,570,789	+	miaA	Synpcc7942_2490	0.90	-4.1
2,570,789	+	miaA	Synpcc7942_2490	0.90	-1.3
2,570,796	+				-4.6
2,570,797	-				-4.3
2,572,925	-				-2.0
2,572,930	-				-2.3
2,572,935	-				+1.8
2,572,951	+				-0.8
2,572,951	+				+2.9
2,572,959	-				+1.7
2,572,986	-				+0.9
2,572,996	+				+2.6
2,573,039	-				+3.7
2,573,041	+				+1.6
2,573,073	-				+2.1
2,573,122	-				+2.2
2,573,133	-				+0.3
2,573,242	+				+1.4
2,573,250	-				-1.3
2,573,340	-				+1.5
2,573,375	-				+1.3
2,573,408	+				-0.3
2,573,416	-				+2.0
2,573,433	+	livF	Synpcc7942_2492	0.11	+0.3
2,573,441	-	livF	Synpcc7942_2492	0.12	+1.0
2,573,458	+	livF	Synpcc7942_2492	0.14	+0.3
2,573,476	+	livF	Synpcc7942_2492	0.17	+3.4
2,573,500	+	livF	Synpcc7942_2492	0.20	+0.4
2,573,555	+	livF	Synpcc7942_2492	0.28	+0.9
2,573,620	-	livF	Synpcc7942_2492	0.37	+0.7
2,573,631	+	livF	Synpcc7942_2492	0.39	+0.1
2,573,634	+	livF	Synpcc7942_2492	0.39	+1.3
2,573,644	+	livF	Synpcc7942_2492	0.40	+1.0
2,573,770	-	livF	Synpcc7942_2492	0.58	-2.3
2,573,781	+	livF	Synpcc7942_2492	0.60	+2.2
2,573,781	+	livF	Synpcc7942_2492	0.60	+0.0
2,573,790	+	livF	Synpcc7942_2492	0.61	-0.3
2,573,800	-	livF	Synpcc7942_2492	0.62	+0.0
2,573,807	+	livF	Synpcc7942_2492	0.63	+1.2
2,573,807	+	livF	Synpcc7942_2492	0.63	+1.6
2,573,807	+	livF	Synpcc7942_2492	0.63	-0.5
2,573,807	+	livF	Synpcc7942_2492	0.63	-0.9
2,573,812	+	livF	Synpcc7942_2492	0.64	+1.3
2,573,813	-	livF	Synpcc7942_2492	0.64	+1.2
2,573,815	-	livF	Synpcc7942_2492	0.64	+1.0
2,573,815	-	livF	Synpcc7942_2492	0.64	-0.3
2,573,825	-	livF	Synpcc7942_2492	0.66	-0.1
2,573,828	-	livF	Synpcc7942_2492	0.66	+2.0
2,573,834	-	livF	Synpcc7942_2492	0.67	+0.6
2,573,868	+	livF	Synpcc7942_2492	0.72	+1.8
2,573,881	-	livF	Synpcc7942_2492	0.74	+0.5
2,573,883	+	livF	Synpcc7942_2492	0.74	-0.5
2,573,910	-	livF	Synpcc7942_2492	0.78	+1.2
2,573,942	-	livF	Synpcc7942_2492	0.82	-2.3