Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1986

Experiment: Polymyxin B sulfate 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.2 mg/ml
2,055,488	-				-0.3
2,055,493	-				+0.5
2,055,501	-				-1.3
2,055,547	-		Synpcc7942_1985	0.11	+0.1
2,055,633	-		Synpcc7942_1985	0.21	-0.9
2,055,670	+		Synpcc7942_1985	0.25	-0.3
2,055,745	+		Synpcc7942_1985	0.34	+0.8
2,055,755	+		Synpcc7942_1985	0.35	+2.0
2,055,763	-		Synpcc7942_1985	0.36	-0.8
2,055,763	-		Synpcc7942_1985	0.36	-0.7
2,055,763	-		Synpcc7942_1985	0.36	-1.3
2,055,801	+		Synpcc7942_1985	0.40	-1.3
2,055,801	+		Synpcc7942_1985	0.40	+0.0
2,055,801	+		Synpcc7942_1985	0.40	+1.7
2,055,801	+		Synpcc7942_1985	0.40	-2.3
2,055,809	-		Synpcc7942_1985	0.41	+0.7
2,055,809	-		Synpcc7942_1985	0.41	+0.5
2,055,816	-		Synpcc7942_1985	0.41	+0.5
2,055,827	+				-1.3
2,055,839	+		Synpcc7942_1985	0.44	-1.3
2,055,839	+		Synpcc7942_1985	0.44	-1.3
2,055,892	-		Synpcc7942_1985	0.50	+2.8
2,055,952	+		Synpcc7942_1985	0.57	+1.0
2,055,952	+		Synpcc7942_1985	0.57	+0.3
2,055,960	-		Synpcc7942_1985	0.58	+4.7
2,055,960	-		Synpcc7942_1985	0.58	+1.0
2,055,960	-		Synpcc7942_1985	0.58	-4.3
2,055,960	-		Synpcc7942_1985	0.58	+1.1
2,055,961	-		Synpcc7942_1985	0.58	-0.0
2,055,970	-		Synpcc7942_1985	0.59	+2.1
2,055,975	-		Synpcc7942_1985	0.59	-0.1
2,056,005	+		Synpcc7942_1985	0.63	+1.0
2,056,040	-		Synpcc7942_1985	0.67	+2.1
2,056,042	+		Synpcc7942_1985	0.67	-1.0
2,056,106	-		Synpcc7942_1985	0.74	-1.5
2,056,122	-		Synpcc7942_1985	0.76	+0.5
2,056,131	+		Synpcc7942_1985	0.77	+1.7
2,056,131	+		Synpcc7942_1985	0.77	+0.0
2,056,191	+		Synpcc7942_1985	0.83	+0.8
2,056,202	+		Synpcc7942_1985	0.85	+0.3
2,056,215	+		Synpcc7942_1985	0.86	-2.9
2,056,237	+		Synpcc7942_1985	0.89	-1.3
2,056,238	+		Synpcc7942_1985	0.89	-2.1
2,056,243	+		Synpcc7942_1985	0.89	+0.0
2,056,250	+				+2.1
2,056,276	-				-0.9
2,056,289	+				+1.3
2,056,289	+				+0.2
2,056,297	-				+2.7
2,056,297	-				+1.1
2,056,297	-				+1.0
2,056,297	-				+0.0
2,056,299	-				-1.3
2,056,383	+				+2.8
2,056,391	-				+2.3
2,056,391	-				+2.4
2,056,470	-	pqqL	Synpcc7942_1986	0.11	+3.8
2,056,474	-	pqqL	Synpcc7942_1986	0.11	+0.8
2,056,474	-	pqqL	Synpcc7942_1986	0.11	+1.1
2,056,487	-	pqqL	Synpcc7942_1986	0.12	+1.9
2,056,538	+	pqqL	Synpcc7942_1986	0.16	+1.9
2,056,570	-	pqqL	Synpcc7942_1986	0.18	-1.9
2,056,578	-	pqqL	Synpcc7942_1986	0.19	+3.5
2,056,578	-	pqqL	Synpcc7942_1986	0.19	+2.4
2,056,592	-	pqqL	Synpcc7942_1986	0.20	+2.0
2,056,607	-	pqqL	Synpcc7942_1986	0.21	-0.5
2,056,632	+	pqqL	Synpcc7942_1986	0.23	+2.1
2,056,640	-	pqqL	Synpcc7942_1986	0.23	+3.4
2,056,642	+	pqqL	Synpcc7942_1986	0.24	+3.2
2,056,652	-	pqqL	Synpcc7942_1986	0.24	+1.8
2,056,698	-	pqqL	Synpcc7942_1986	0.28	+2.4
2,056,724	+	pqqL	Synpcc7942_1986	0.30	+1.7
2,056,724	+	pqqL	Synpcc7942_1986	0.30	+0.5
2,056,732	-	pqqL	Synpcc7942_1986	0.30	+3.3
2,056,734	+	pqqL	Synpcc7942_1986	0.30	+0.0
2,056,735	-	pqqL	Synpcc7942_1986	0.31	+2.9
2,056,761	-	pqqL	Synpcc7942_1986	0.33	+1.9
2,056,780	-	pqqL	Synpcc7942_1986	0.34	+1.7
2,056,796	-	pqqL	Synpcc7942_1986	0.35	+2.2
2,056,800	+	pqqL	Synpcc7942_1986	0.35	+2.7
2,056,800	+	pqqL	Synpcc7942_1986	0.35	+2.4
2,056,806	+	pqqL	Synpcc7942_1986	0.36	+3.3
2,056,806	+	pqqL	Synpcc7942_1986	0.36	+2.1
2,056,808	-	pqqL	Synpcc7942_1986	0.36	+2.0
2,056,842	+	pqqL	Synpcc7942_1986	0.39	+2.3
2,056,848	-	pqqL	Synpcc7942_1986	0.39	+0.3
2,056,867	+	pqqL	Synpcc7942_1986	0.41	+1.2
2,056,875	-	pqqL	Synpcc7942_1986	0.41	-2.3
2,056,920	-	pqqL	Synpcc7942_1986	0.45	+4.3
2,056,926	+	pqqL	Synpcc7942_1986	0.45	+3.7
2,056,934	-	pqqL	Synpcc7942_1986	0.46	+1.9
2,056,936	+	pqqL	Synpcc7942_1986	0.46	+2.9
2,056,949	-	pqqL	Synpcc7942_1986	0.47	+2.8
2,056,971	-	pqqL	Synpcc7942_1986	0.48	+3.4
2,057,004	+	pqqL	Synpcc7942_1986	0.51	+2.1
2,057,009	+	pqqL	Synpcc7942_1986	0.51	+1.7
2,057,012	-	pqqL	Synpcc7942_1986	0.51	+1.5
2,057,033	-	pqqL	Synpcc7942_1986	0.53	+3.5
2,057,085	-	pqqL	Synpcc7942_1986	0.57	+1.5
2,057,101	+	pqqL	Synpcc7942_1986	0.58	+3.3
2,057,115	-	pqqL	Synpcc7942_1986	0.59	+0.5
2,057,144	-	pqqL	Synpcc7942_1986	0.61	+1.9
2,057,145	-	pqqL	Synpcc7942_1986	0.62	+1.6
2,057,150	-	pqqL	Synpcc7942_1986	0.62	+1.5
2,057,150	-	pqqL	Synpcc7942_1986	0.62	+1.1
2,057,294	+	pqqL	Synpcc7942_1986	0.73	+2.9
2,057,310	-	pqqL	Synpcc7942_1986	0.74	+1.5
2,057,310	-	pqqL	Synpcc7942_1986	0.74	+4.3
2,057,321	-	pqqL	Synpcc7942_1986	0.75	+3.2
2,057,325	+	pqqL	Synpcc7942_1986	0.75	-0.7
2,057,333	-	pqqL	Synpcc7942_1986	0.76	+2.3
2,057,338	-	pqqL	Synpcc7942_1986	0.76	+2.7
2,057,338	-	pqqL	Synpcc7942_1986	0.76	+5.0
2,057,346	+	pqqL	Synpcc7942_1986	0.77	+2.6
2,057,387	-	pqqL	Synpcc7942_1986	0.80	+3.1
2,057,420	-	pqqL	Synpcc7942_1986	0.82	+1.5
2,057,465	-	pqqL	Synpcc7942_1986	0.86	+2.5
2,057,494	+	pqqL	Synpcc7942_1986	0.88	+0.9
2,057,502	-	pqqL	Synpcc7942_1986	0.89	+1.7
2,057,502	-	pqqL	Synpcc7942_1986	0.89	+0.3
2,057,571	+				+2.7
2,057,625	-				+0.1
2,057,634	-				+1.8
2,057,639	+				+0.7
2,057,666	-				+0.4
2,057,687	+				+0.7
2,057,710	+				-1.1
2,057,742	-				-0.3
2,057,824	-				+0.7
2,057,919	-	rpaC	Synpcc7942_1987	0.32	+0.5
2,057,924	+	rpaC	Synpcc7942_1987	0.33	-0.3
2,057,932	-	rpaC	Synpcc7942_1987	0.36	-0.1
2,057,938	-	rpaC	Synpcc7942_1987	0.38	+0.5
2,057,940	+	rpaC	Synpcc7942_1987	0.38	+1.0
2,057,948	-	rpaC	Synpcc7942_1987	0.41	+2.9
2,057,948	-	rpaC	Synpcc7942_1987	0.41	+1.3
2,057,976	+	rpaC	Synpcc7942_1987	0.50	+2.1
2,058,039	+	rpaC	Synpcc7942_1987	0.70	+0.3
2,058,044	-	rpaC	Synpcc7942_1987	0.71	-1.3
2,058,172	+				+1.0
2,058,179	-				-1.9
2,058,200	-				+0.4
2,058,247	+				+1.5
2,058,277	+				+0.3
2,058,304	-				+1.3
2,058,368	+				-2.3
2,058,403	+				-0.1
2,058,420	-				+1.3
2,058,422	+				+1.0
2,058,456	-				-0.6
2,058,472	-				+3.1
2,058,472	-				-2.9
2,058,479	-				+2.5
2,058,486	-				+0.0
2,058,488	+				+1.7
2,058,496	+				-2.3
2,058,501	+				+0.4
2,058,504	-				-3.3
2,058,518	+				+2.3
2,058,610	-				+1.3
2,058,638	+				+1.9
2,058,644	-				+1.7