Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1248

Experiment: Polymyxin B sulfate 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.2 mg/ml
1,271,563	-	crtiso	Synpcc7942_1246	0.50	+1.7
1,271,563	-	crtiso	Synpcc7942_1246	0.50	+1.0
1,271,632	-	crtiso	Synpcc7942_1246	0.55	+2.7
1,271,702	+	crtiso	Synpcc7942_1246	0.59	+1.4
1,271,737	+	crtiso	Synpcc7942_1246	0.62	+2.0
1,271,771	+	crtiso	Synpcc7942_1246	0.64	+0.3
1,271,778	-	crtiso	Synpcc7942_1246	0.64	+2.0
1,271,900	+	crtiso	Synpcc7942_1246	0.72	-0.3
1,271,909	+	crtiso	Synpcc7942_1246	0.73	-1.1
1,271,911	+	crtiso	Synpcc7942_1246	0.73	+0.6
1,271,917	-	crtiso	Synpcc7942_1246	0.74	+2.1
1,271,985	-	crtiso	Synpcc7942_1246	0.78	+0.8
1,271,986	-	crtiso	Synpcc7942_1246	0.78	+3.2
1,271,988	+	crtiso	Synpcc7942_1246	0.78	+2.8
1,272,007	+	crtiso	Synpcc7942_1246	0.79	+1.7
1,272,052	+	crtiso	Synpcc7942_1246	0.82	+0.6
1,272,057	+	crtiso	Synpcc7942_1246	0.83	+1.2
1,272,057	+	crtiso	Synpcc7942_1246	0.83	+1.1
1,272,065	-	crtiso	Synpcc7942_1246	0.83	-0.8
1,272,065	-	crtiso	Synpcc7942_1246	0.83	+1.9
1,272,137	+	crtiso	Synpcc7942_1246	0.88	+0.5
1,272,144	-	crtiso	Synpcc7942_1246	0.89	+2.0
1,272,183	+				+1.9
1,272,191	-				+2.6
1,272,196	+				+2.4
1,272,196	+				+0.7
1,272,227	-				+0.8
1,272,243	-				+0.2
1,272,249	-				+1.9
1,272,280	+				+1.9
1,272,311	+				-0.9
1,272,312	+				+1.9
1,272,320	-				+0.7
1,272,320	-				+0.6
1,272,320	-				-0.7
1,272,325	+				+0.3
1,272,333	-				+1.7
1,272,359	+		Synpcc7942_1247	0.15	-0.3
1,272,359	+		Synpcc7942_1247	0.15	+3.3
1,272,367	-		Synpcc7942_1247	0.19	-1.5
1,272,371	-		Synpcc7942_1247	0.20	+0.4
1,272,390	-		Synpcc7942_1247	0.28	+1.3
1,272,442	-		Synpcc7942_1247	0.50	-1.3
1,272,477	-		Synpcc7942_1247	0.65	+0.6
1,272,481	+		Synpcc7942_1247	0.66	-1.3
1,272,484	+		Synpcc7942_1247	0.68	+1.8
1,272,490	+		Synpcc7942_1247	0.70	-0.1
1,272,493	-		Synpcc7942_1247	0.71	+2.1
1,272,495	+		Synpcc7942_1247	0.72	+1.4
1,272,500	+		Synpcc7942_1247	0.74	-0.6
1,272,528	+		Synpcc7942_1247	0.86	-0.7
1,272,536	-		Synpcc7942_1247	0.89	+0.9
1,272,540	-				+2.0
1,272,622	+		Synpcc7942_1248	0.12	+2.4
1,272,622	+		Synpcc7942_1248	0.12	-0.1
1,272,627	+		Synpcc7942_1248	0.13	-0.3
1,272,635	-		Synpcc7942_1248	0.15	+0.7
1,272,717	+		Synpcc7942_1248	0.29	+1.7
1,272,722	+		Synpcc7942_1248	0.30	+0.3
1,272,725	-		Synpcc7942_1248	0.30	-2.9
1,272,730	-		Synpcc7942_1248	0.31	-1.0
1,272,732	+		Synpcc7942_1248	0.32	-0.3
1,272,735	-		Synpcc7942_1248	0.32	-2.3
1,272,741	+		Synpcc7942_1248	0.33	-1.3
1,272,762	+		Synpcc7942_1248	0.37	+1.7
1,272,762	+		Synpcc7942_1248	0.37	+4.1
1,272,770	-		Synpcc7942_1248	0.38	+0.1
1,272,786	+		Synpcc7942_1248	0.41	+1.0
1,272,794	-		Synpcc7942_1248	0.42	-0.1
1,272,806	-		Synpcc7942_1248	0.45	+2.5
1,272,846	+		Synpcc7942_1248	0.51	+0.3
1,272,859	+		Synpcc7942_1248	0.54	-0.5
1,272,864	+		Synpcc7942_1248	0.55	+0.8
1,272,864	+		Synpcc7942_1248	0.55	-0.6
1,272,864	+		Synpcc7942_1248	0.55	+1.8
1,272,874	+		Synpcc7942_1248	0.56	+1.4
1,272,882	-		Synpcc7942_1248	0.58	+2.6
1,272,886	-		Synpcc7942_1248	0.58	+1.0
1,272,908	+				-0.3
1,272,908	+		Synpcc7942_1248	0.62	-0.0
1,272,908	+		Synpcc7942_1248	0.62	+0.2
1,272,908	+		Synpcc7942_1248	0.62	+3.3
1,272,915	-		Synpcc7942_1248	0.64	+0.5
1,272,916	-		Synpcc7942_1248	0.64	+0.4
1,272,916	-		Synpcc7942_1248	0.64	-2.0
1,273,016	-		Synpcc7942_1248	0.81	-0.3
1,273,017	-		Synpcc7942_1248	0.81	-0.3
1,273,041	+		Synpcc7942_1248	0.86	+0.7
1,273,078	+				-0.3
1,273,101	+				-0.3
1,273,101	+				+2.9
1,273,146	+				-1.3
1,273,229	+				+3.4
1,273,229	+				-1.3
1,273,237	-				-1.3
1,273,237	-				-0.3
1,273,237	-				-3.9
1,273,273	-				-2.9
1,273,286	-				+0.9
1,273,295	+				-0.5
1,273,334	+				+1.4
1,273,418	-				+2.3
1,273,469	+				-1.3
1,273,587	-				-1.3
1,273,962	-	psaF	Synpcc7942_1250	0.38	-1.3