Strain Fitness in Sinorhizobium meliloti 1021 around SMc04392

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
3,594,219	+				-2.6
3,594,219	+				+0.3
3,594,220	-				+0.7
3,594,225	+				-2.8
3,594,225	+				-0.0
3,594,226	-				-0.2
3,594,268	+				+0.5
3,594,268	+				+0.9
3,594,268	+				-2.0
3,594,269	-				-0.9
3,594,528	-		SMc04391	0.12	+2.0
3,594,596	-		SMc04391	0.20	-1.1
3,594,730	+		SMc04391	0.38	-0.2
3,595,235	-				+0.4
3,595,353	+				+1.2
3,595,353	+				+0.0
3,595,600	-		SMc04392	0.26	-0.5
3,595,600	-		SMc04392	0.26	-3.2
3,595,740	+		SMc04392	0.35	-1.8
3,595,740	+		SMc04392	0.35	+0.0
3,595,740	+		SMc04392	0.35	-1.4
3,595,741	-		SMc04392	0.35	-3.0
3,595,770	+		SMc04392	0.37	-0.7
3,595,771	-		SMc04392	0.37	+0.2
3,595,907	+		SMc04392	0.46	+0.9
3,595,984	-		SMc04392	0.51	+2.0
3,596,197	+		SMc04392	0.66	-0.5
3,596,197	-		SMc04392	0.66	+1.2
3,596,460	+		SMc04392	0.83	+0.8
3,596,460	+		SMc04392	0.83	+0.1
3,596,461	-		SMc04392	0.83	-4.2
3,596,488	-		SMc04392	0.85	-3.0
3,596,490	+		SMc04392	0.85	-1.1
3,596,490	+		SMc04392	0.85	+0.3
3,596,526	+		SMc04392	0.87	+0.6
3,596,526	+		SMc04392	0.87	-1.4
3,596,527	-		SMc04392	0.87	-0.1
3,596,628	-				+4.5
3,597,006	-		SMc04393	0.25	+0.8
3,597,024	+		SMc04393	0.27	+0.4
3,597,100	+		SMc04393	0.34	-4.0
3,597,100	+		SMc04393	0.34	-3.0
3,597,100	+		SMc04393	0.34	-2.9
3,597,101	-		SMc04393	0.34	+0.2
3,597,173	+		SMc04393	0.40	-1.4
3,597,174	-		SMc04393	0.40	+2.8
3,597,272	+		SMc04393	0.49	+0.0
3,597,272	+		SMc04393	0.49	+0.2
3,597,587	+		SMc04393	0.77	+0.0
3,597,588	-		SMc04393	0.78	-0.2
3,597,588	-		SMc04393	0.78	-0.0
3,597,588	-		SMc04393	0.78	-0.9