Strain Fitness in Sinorhizobium meliloti 1021 around SMc04347

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
2,147,572	+		SMc04342	0.43	+0.4
2,147,572	+		SMc04342	0.43	+1.0
2,147,573	-		SMc04342	0.43	+0.7
2,147,573	-		SMc04342	0.43	-0.7
2,147,573	-		SMc04342	0.43	-0.3
2,147,998	+		SMc04342	0.88	-0.3
2,147,999	-		SMc04342	0.88	+0.2
2,148,219	-		SMc04345	0.29	+0.6
2,148,241	-		SMc04345	0.36	+0.2
2,148,241	-		SMc04345	0.36	-0.2
2,148,601	+				+0.2
2,148,602	-				-2.3
2,148,705	+		SMc04347	0.11	+0.8
2,148,705	+		SMc04347	0.11	+0.8
2,148,706	-		SMc04347	0.11	+2.0
2,148,904	+		SMc04347	0.21	-3.6
2,148,904	+		SMc04347	0.21	-0.2
2,148,904	+		SMc04347	0.21	-0.7
2,148,933	+		SMc04347	0.22	+0.5
2,148,933	+		SMc04347	0.22	-3.0
2,149,037	+		SMc04347	0.27	-1.0
2,149,037	+		SMc04347	0.27	+0.6
2,149,141	+		SMc04347	0.32	+0.1
2,149,142	-		SMc04347	0.32	+0.6
2,149,279	+		SMc04347	0.39	-2.3
2,149,279	+		SMc04347	0.39	+0.2
2,149,280	-		SMc04347	0.39	+1.2
2,149,280	-		SMc04347	0.39	-1.5
2,149,526	+		SMc04347	0.51	-0.5
2,149,526	+		SMc04347	0.51	+0.3
2,149,527	-		SMc04347	0.51	-0.1
2,149,552	+		SMc04347	0.52	+0.7
2,149,553	-		SMc04347	0.52	+0.7
2,149,554	+		SMc04347	0.52	-4.2
2,149,555	-		SMc04347	0.52	-1.6
2,149,555	-		SMc04347	0.52	+0.0
2,149,555	-				+3.8
2,149,826	+		SMc04347	0.66	+2.6
2,149,936	+		SMc04347	0.71	-1.4
2,150,030	-		SMc04347	0.76	+1.0
2,150,030	-		SMc04347	0.76	-0.4
2,150,077	-		SMc04347	0.78	-0.8
2,150,111	-		SMc04347	0.80	+0.0
2,150,354	+				+1.3
2,150,355	-				+1.5
2,150,355	-				+0.6
2,150,714	-		SMc04451	0.20	+2.1
2,150,714	-		SMc04451	0.20	+0.6
2,150,714	-		SMc04451	0.20	+0.3
2,150,714	-		SMc04451	0.20	-2.0
2,150,726	+		SMc04451	0.21	-1.4
2,150,798	+		SMc04451	0.32	-0.0
2,150,798	+		SMc04451	0.32	-1.1
2,150,799	-		SMc04451	0.32	+0.2
2,150,799	-		SMc04451	0.32	-0.3
2,150,799	-		SMc04451	0.32	+1.2
2,150,810	-		SMc04451	0.34	-0.3
2,150,821	+		SMc04451	0.36	-0.3
2,151,028	+		SMc04451	0.67	+1.3
2,151,029	-		SMc04451	0.67	+0.4
2,151,106	+		SMc04451	0.79	+0.2
2,151,106	+		SMc04451	0.79	+2.3
2,151,107	-		SMc04451	0.79	+0.9
2,151,107	-		SMc04451	0.79	+0.1
2,151,107	-		SMc04451	0.79	-5.4
2,151,244	+				+0.1
2,151,344	+				-0.5
2,151,344	+				-1.8
2,151,346	+				+0.1
2,151,347	-				-2.6