Strain Fitness in Sinorhizobium meliloti 1021 around SMc04252

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
2,077,764	-				-0.0
2,077,766	+		SMc04251	0.36	-0.6
2,077,766	+		SMc04251	0.36	-0.8
2,077,766	+		SMc04251	0.36	+0.4
2,077,766	+		SMc04251	0.36	-3.6
2,077,766	+		SMc04251	0.36	-1.8
2,077,767	-		SMc04251	0.36	-4.2
2,077,767	-		SMc04251	0.36	-0.0
2,077,769	+		SMc04251	0.36	+1.1
2,077,770	-		SMc04251	0.36	+1.4
2,077,770	-		SMc04251	0.36	-0.2
2,077,784	+		SMc04251	0.38	+1.0
2,077,784	+		SMc04251	0.38	+1.1
2,077,808	+		SMc04251	0.40	+0.1
2,077,860	-		SMc04251	0.45	-1.0
2,078,163	-		SMc04251	0.72	+0.2
2,078,163	-		SMc04251	0.72	+0.2
2,078,169	-		SMc04251	0.73	-1.8
2,078,169	-		SMc04251	0.73	+0.0
2,078,294	+		SMc04251	0.84	+0.4
2,078,295	-		SMc04251	0.84	-4.5
2,078,295	-		SMc04251	0.84	+1.0
2,078,321	+		SMc04251	0.86	-1.3
2,078,321	+		SMc04251	0.86	-1.3
2,078,321	+		SMc04251	0.86	-1.1
2,078,322	-		SMc04251	0.86	-1.3
2,078,329	-		SMc04251	0.87	+1.1
2,078,329	-		SMc04251	0.87	+0.8
2,078,329	-		SMc04251	0.87	+0.4
2,078,585	+				-0.1
2,078,643	+				+0.7
2,078,643	+				-0.2
2,078,643	+				-0.1
2,078,643	+				-2.5
2,078,643	+				-2.6
2,078,644	-				-0.3
2,078,644	-				+1.0
2,078,700	+				-0.8
2,079,271	-		SMc04252	0.49	+0.0
2,079,271	-		SMc04252	0.49	-0.3
2,079,282	+		SMc04252	0.50	-2.0
2,079,283	-		SMc04252	0.50	-0.6
2,079,283	-		SMc04252	0.50	-0.2
2,079,284	+		SMc04252	0.51	+1.0
2,079,284	+		SMc04252	0.51	-0.2
2,079,284	+		SMc04252	0.51	+0.4
2,079,284	+		SMc04252	0.51	-1.0
2,079,284	+		SMc04252	0.51	-0.1
2,079,285	-		SMc04252	0.51	-1.6
2,079,285	-		SMc04252	0.51	-3.1
2,079,302	+		SMc04252	0.52	+0.2
2,079,303	-		SMc04252	0.52	-0.5
2,079,303	-		SMc04252	0.52	-2.5
2,079,303	-		SMc04252	0.52	+0.6
2,079,386	+		SMc04252	0.60	-0.0
2,079,386	+		SMc04252	0.60	-1.7
2,079,387	-		SMc04252	0.61	+0.4
2,079,387	-		SMc04252	0.61	-1.5
2,079,387	-		SMc04252	0.61	-0.8
2,079,387	-		SMc04252	0.61	-3.5
2,079,402	-		SMc04252	0.62	-1.0
2,079,596	+		SMc04252	0.81	+2.1
2,079,596	+		SMc04252	0.81	+1.1
2,079,596	+		SMc04252	0.81	+0.8
2,079,596	+		SMc04252	0.81	+0.2
2,079,749	+				-1.5
2,079,765	-				-2.7
2,079,765	-				+2.1
2,079,797	+				-0.0
2,079,797	+				-0.7
2,079,797	+				+0.3
2,079,797	+				-0.4
2,079,829	+				+0.2
2,079,830	-				-0.3
2,079,861	+				-1.1
2,079,861	+				+0.1
2,079,862	-				+1.6
2,079,862	-				-0.1
2,079,869	+				+0.4
2,079,870	-				+0.4
2,079,870	-				-4.1
2,079,870	-				+0.6
2,079,963	-				-1.3
2,079,963	-				-0.6
2,079,963	-				-0.3
2,080,114	+				+1.8
2,080,114	+				-0.3
2,080,216	+		SMc04253	0.12	-0.4
2,080,217	-		SMc04253	0.12	-0.6
2,080,267	+		SMc04253	0.16	-3.1
2,080,268	-		SMc04253	0.16	+0.5
2,080,290	+		SMc04253	0.18	-1.7
2,080,290	+		SMc04253	0.18	+0.4
2,080,447	-		SMc04253	0.32	-0.5
2,080,670	+		SMc04253	0.52	-1.0
2,080,670	+		SMc04253	0.52	+1.7
2,080,670	+		SMc04253	0.52	-1.4
2,080,670	+		SMc04253	0.52	-1.0
2,080,671	-		SMc04253	0.52	-1.1
2,080,674	+		SMc04253	0.52	-0.4
2,080,674	+		SMc04253	0.52	-0.0
2,080,674	+		SMc04253	0.52	-1.3
2,080,675	-		SMc04253	0.52	-1.0
2,080,675	-		SMc04253	0.52	-0.2
2,080,675	-		SMc04253	0.52	-4.9
2,080,675	-		SMc04253	0.52	+1.0
2,080,675	-		SMc04253	0.52	+0.0
2,080,675	-		SMc04253	0.52	+0.2
2,080,675	-		SMc04253	0.52	+0.3
2,080,677	+		SMc04253	0.52	-1.3
2,080,678	-		SMc04253	0.52	-0.6
2,080,678	-		SMc04253	0.52	+1.3
2,080,678	-		SMc04253	0.52	-0.4
2,080,678	-		SMc04253	0.52	-3.3