Strain Fitness in Sinorhizobium meliloti 1021 around SMc03204
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,167,817 | - | SMc03203 | 0.52 | -0.2 | |
3,167,817 | - | SMc03203 | 0.52 | -3.1 | |
3,167,817 | - | SMc03203 | 0.52 | -0.1 | |
3,167,931 | + | SMc03203 | 0.61 | -1.3 | |
3,168,211 | + | SMc03203 | 0.83 | +0.4 | |
3,168,212 | - | SMc03203 | 0.83 | -2.3 | |
3,168,425 | + | +0.2 | |||
3,168,426 | - | -0.5 | |||
3,168,798 | + | SMc03204 | 0.26 | +0.3 | |
3,168,992 | - | SMc03204 | 0.40 | -0.3 | |
3,169,353 | - | SMc03204 | 0.66 | -1.3 | |
3,169,442 | - | SMc03204 | 0.72 | +0.4 | |
3,169,752 | + | +0.0 | |||
3,169,752 | + | -1.0 | |||
3,169,752 | + | +0.7 | |||
3,169,753 | - | +1.8 | |||
3,170,020 | - | +0.2 | |||
3,170,143 | - | -0.5 | |||
3,170,165 | + | -0.2 | |||
3,170,169 | - | -2.9 | |||
3,170,185 | + | -3.4 | |||
3,170,186 | - | -0.7 | |||
3,170,236 | - | +0.8 | |||
3,170,788 | - | SMc03205 | 0.65 | +2.3 |
Or see this region's nucleotide sequence