Strain Fitness in Sinorhizobium meliloti 1021 around SMc03174
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,136,390 | + | SMc03174 | 0.28 | -0.5 | |
3,136,390 | + | SMc03174 | 0.28 | +1.6 | |
3,136,392 | + | SMc03174 | 0.28 | -3.9 | |
3,136,392 | + | SMc03174 | 0.28 | +1.1 | |
3,136,392 | + | SMc03174 | 0.28 | +1.0 | |
3,136,392 | + | SMc03174 | 0.28 | -2.0 | |
3,136,393 | - | SMc03174 | 0.28 | -0.8 | |
3,136,393 | - | SMc03174 | 0.28 | +1.6 | |
3,136,393 | - | SMc03174 | 0.28 | -0.4 | |
3,136,719 | - | SMc03174 | 0.81 | +1.0 | |
3,136,738 | - | SMc03174 | 0.84 | -1.7 | |
3,136,738 | - | SMc03174 | 0.84 | +1.0 | |
3,136,738 | - | SMc03174 | 0.84 | -1.4 | |
3,136,738 | - | SMc03174 | 0.84 | -3.4 | |
3,136,898 | + | -0.1 | |||
3,137,001 | + | +1.1 | |||
3,137,036 | + | +0.7 | |||
3,137,326 | + | SMc03175 | 0.30 | -0.6 | |
3,137,327 | - | SMc03175 | 0.30 | -1.6 | |
3,137,327 | - | SMc03175 | 0.30 | +0.8 | |
3,137,327 | - | SMc03175 | 0.30 | +1.8 | |
3,137,483 | - | SMc03175 | 0.47 | -2.1 | |
3,137,713 | - | SMc03175 | 0.71 | +1.4 | |
3,137,713 | - | SMc03175 | 0.71 | -0.1 | |
3,137,778 | + | SMc03175 | 0.78 | -3.7 | |
3,137,778 | + | SMc03175 | 0.78 | -0.4 | |
3,137,778 | + | SMc03175 | 0.78 | -2.7 | |
3,137,779 | - | SMc03175 | 0.78 | -1.8 |
Or see this region's nucleotide sequence