Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03061 and SMc03062 are separated by 251 nucleotides SMc03062 and SMc03063 are separated by 1 nucleotides
SMc03061: SMc03061 - ABC transporter for D-maltose/D-trehalose/sucrose, substrate-binding component (AglE) <small>(from data)</small>, at 757,756 to 759,132
SMc03061
SMc03062: SMc03062 - ABC transporter for D-maltose/D-trehalose/sucrose, permease component 1 (AglF) <small>(from data)</small>, at 759,384 to 760,394
SMc03062
SMc03063: SMc03063 - ABC transporter for D-maltose/D-trehalose/sucrose, permease component 2 (AglG) <small>(from data)</small>, at 760,396 to 761,538
SMc03063
Position (kb) 759
760
761 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 758.492 kb on - strand, within SMc03061 at 758.492 kb on - strand, within SMc03061 at 758.516 kb on + strand, within SMc03061 at 758.517 kb on - strand, within SMc03061 at 758.668 kb on + strand, within SMc03061 at 758.668 kb on + strand, within SMc03061 at 758.669 kb on - strand, within SMc03061 at 758.669 kb on - strand, within SMc03061 at 758.669 kb on - strand, within SMc03061 at 758.746 kb on + strand, within SMc03061 at 758.746 kb on + strand, within SMc03061 at 758.746 kb on + strand, within SMc03061 at 758.746 kb on + strand, within SMc03061 at 758.747 kb on - strand, within SMc03061 at 758.747 kb on - strand, within SMc03061 at 758.782 kb on - strand, within SMc03061 at 758.914 kb on + strand, within SMc03061 at 758.939 kb on - strand, within SMc03061 at 759.105 kb on - strand at 759.212 kb on - strand at 759.212 kb on - strand at 759.212 kb on - strand at 759.212 kb on - strand at 759.312 kb on + strand at 759.313 kb on - strand at 759.330 kb on + strand at 759.330 kb on + strand at 759.331 kb on - strand at 759.589 kb on - strand, within SMc03062 at 759.589 kb on - strand, within SMc03062 at 759.598 kb on - strand, within SMc03062 at 759.670 kb on - strand, within SMc03062 at 759.806 kb on + strand, within SMc03062 at 759.879 kb on + strand, within SMc03062 at 759.880 kb on - strand, within SMc03062 at 760.818 kb on + strand, within SMc03063 at 760.855 kb on + strand, within SMc03063 at 760.855 kb on + strand, within SMc03063 at 760.856 kb on - strand, within SMc03063 at 760.856 kb on - strand, within SMc03063 at 760.856 kb on - strand, within SMc03063 at 760.964 kb on - strand, within SMc03063 at 761.071 kb on + strand, within SMc03063 at 761.071 kb on + strand, within SMc03063 at 761.072 kb on - strand, within SMc03063 at 761.072 kb on - strand, within SMc03063 at 761.072 kb on - strand, within SMc03063 at 761.073 kb on + strand, within SMc03063 at 761.073 kb on + strand, within SMc03063 at 761.073 kb on + strand, within SMc03063 at 761.073 kb on + strand, within SMc03063 at 761.074 kb on - strand, within SMc03063 at 761.074 kb on - strand, within SMc03063 at 761.113 kb on + strand, within SMc03063 at 761.113 kb on + strand, within SMc03063 at 761.113 kb on + strand, within SMc03063 at 761.113 kb on + strand, within SMc03063 at 761.113 kb on + strand, within SMc03063 at 761.113 kb on + strand, within SMc03063 at 761.113 kb on + strand, within SMc03063 at 761.113 kb on + strand, within SMc03063 at 761.114 kb on - strand, within SMc03063 at 761.114 kb on - strand, within SMc03063 at 761.114 kb on - strand, within SMc03063 at 761.114 kb on - strand, within SMc03063 at 761.114 kb on - strand, within SMc03063 at 761.114 kb on - strand, within SMc03063 at 761.114 kb on - strand, within SMc03063 at 761.114 kb on - strand, within SMc03063 at 761.114 kb on - strand, within SMc03063 at 761.115 kb on + strand, within SMc03063 at 761.115 kb on + strand, within SMc03063 at 761.115 kb on + strand, within SMc03063 at 761.164 kb on + strand, within SMc03063 at 761.165 kb on - strand, within SMc03063 at 761.165 kb on - strand, within SMc03063 at 761.165 kb on - strand, within SMc03063 at 761.179 kb on + strand, within SMc03063 at 761.180 kb on - strand, within SMc03063
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 758,492 - SMc03061 0.53 +1.7 758,492 - SMc03061 0.53 -1.8 758,516 + SMc03061 0.55 -1.0 758,517 - SMc03061 0.55 -2.4 758,668 + SMc03061 0.66 -0.2 758,668 + SMc03061 0.66 +0.1 758,669 - SMc03061 0.66 +0.8 758,669 - SMc03061 0.66 +1.2 758,669 - SMc03061 0.66 +0.4 758,746 + SMc03061 0.72 +1.1 758,746 + SMc03061 0.72 +0.2 758,746 + SMc03061 0.72 +0.4 758,746 + SMc03061 0.72 -1.3 758,747 - SMc03061 0.72 +2.2 758,747 - SMc03061 0.72 +2.7 758,782 - SMc03061 0.75 +0.2 758,914 + SMc03061 0.84 -0.4 758,939 - SMc03061 0.86 +3.2 759,105 - +0.9 759,212 - +1.5 759,212 - +0.2 759,212 - +1.1 759,212 - -2.1 759,312 + -4.0 759,313 - +0.0 759,330 + +2.5 759,330 + +0.6 759,331 - +1.9 759,589 - SMc03062 0.20 -1.3 759,589 - SMc03062 0.20 +2.7 759,598 - SMc03062 0.21 +4.9 759,670 - SMc03062 0.28 -3.2 759,806 + SMc03062 0.42 -1.9 759,879 + SMc03062 0.49 -0.1 759,880 - SMc03062 0.49 -0.8 760,818 + SMc03063 0.37 +1.7 760,855 + SMc03063 0.40 -0.3 760,855 + SMc03063 0.40 +2.5 760,856 - SMc03063 0.40 +0.5 760,856 - SMc03063 0.40 +0.9 760,856 - SMc03063 0.40 -2.2 760,964 - SMc03063 0.50 -0.5 761,071 + SMc03063 0.59 +0.8 761,071 + SMc03063 0.59 -1.6 761,072 - SMc03063 0.59 +0.4 761,072 - SMc03063 0.59 +0.6 761,072 - SMc03063 0.59 +0.4 761,073 + SMc03063 0.59 +0.3 761,073 + SMc03063 0.59 +1.1 761,073 + SMc03063 0.59 -1.7 761,073 + SMc03063 0.59 -4.7 761,074 - SMc03063 0.59 +0.4 761,074 - SMc03063 0.59 +0.1 761,113 + SMc03063 0.63 +0.4 761,113 + SMc03063 0.63 -0.1 761,113 + SMc03063 0.63 +0.2 761,113 + SMc03063 0.63 -0.5 761,113 + SMc03063 0.63 +2.2 761,113 + SMc03063 0.63 -0.1 761,113 + SMc03063 0.63 +2.0 761,113 + SMc03063 0.63 -0.8 761,114 - SMc03063 0.63 +0.6 761,114 - SMc03063 0.63 -3.6 761,114 - SMc03063 0.63 -0.6 761,114 - SMc03063 0.63 -2.0 761,114 - SMc03063 0.63 +0.6 761,114 - SMc03063 0.63 -2.0 761,114 - SMc03063 0.63 -2.5 761,114 - SMc03063 0.63 +1.6 761,114 - SMc03063 0.63 +0.4 761,115 + SMc03063 0.63 -0.5 761,115 + SMc03063 0.63 +0.2 761,115 + SMc03063 0.63 -0.9 761,164 + SMc03063 0.67 -0.8 761,165 - SMc03063 0.67 +0.8 761,165 - SMc03063 0.67 +1.1 761,165 - SMc03063 0.67 -0.7 761,179 + SMc03063 0.69 +0.3 761,180 - SMc03063 0.69 +0.0
Or see this region's nucleotide sequence