Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03025 and SMc03026 overlap by 4 nucleotides SMc03026 and SMc03027 are separated by 307 nucleotides SMc03027 and SMc03028 are separated by 6 nucleotides SMc03028 and SMc03029 overlap by 1 nucleotides SMc03029 and SMc03030 are separated by 11 nucleotides
SMc03025: SMc03025 - flagellum-specific ATP synthase, at 722,679 to 724,082
SMc03025
SMc03026: SMc03026 - hypothetical protein, at 724,079 to 724,630
SMc03026
SMc03027: SMc03027 - flagellar basal body rod protein FlgB, at 724,938 to 725,318
SMc03027
SMc03028: SMc03028 - flagellar basal body rod protein FlgC, at 725,325 to 725,744
SMc03028
SMc03029: SMc03029 - flagellar hook-basal body protein FliE, at 725,744 to 726,079
SMc03029
SMc03030: SMc03030 - flagellar basal body rod protein FlgG, at 726,091 to 726,879
SMc03030
Position (kb) 724
725
726 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 723.955 kb on - strand at 724.158 kb on + strand, within SMc03026 at 724.158 kb on + strand, within SMc03026 at 724.159 kb on - strand, within SMc03026 at 724.159 kb on - strand at 724.211 kb on + strand, within SMc03026 at 724.212 kb on - strand, within SMc03026 at 724.217 kb on + strand, within SMc03026 at 724.218 kb on - strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.516 kb on + strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.526 kb on - strand, within SMc03026 at 724.828 kb on - strand at 724.863 kb on + strand at 724.863 kb on + strand at 724.864 kb on - strand at 724.864 kb on - strand at 724.909 kb on - strand at 725.202 kb on - strand, within SMc03027 at 725.202 kb on - strand, within SMc03027 at 725.253 kb on + strand, within SMc03027 at 725.316 kb on + strand at 725.317 kb on - strand at 725.317 kb on - strand at 725.349 kb on - strand at 725.621 kb on + strand, within SMc03028 at 725.665 kb on - strand, within SMc03028 at 725.742 kb on + strand at 725.742 kb on + strand at 725.767 kb on - strand at 725.767 kb on - strand at 725.767 kb on - strand at 726.051 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 723,955 - +1.2 724,158 + SMc03026 0.14 +0.5 724,158 + SMc03026 0.14 -0.6 724,159 - SMc03026 0.14 -0.1 724,159 - -2.3 724,211 + SMc03026 0.24 -2.9 724,212 - SMc03026 0.24 -0.4 724,217 + SMc03026 0.25 -0.8 724,218 - SMc03026 0.25 -0.1 724,514 + SMc03026 0.79 -2.3 724,514 + SMc03026 0.79 -0.7 724,514 + SMc03026 0.79 -1.0 724,514 + SMc03026 0.79 -3.4 724,514 + SMc03026 0.79 -0.7 724,514 + SMc03026 0.79 -0.2 724,514 + SMc03026 0.79 +0.3 724,514 + SMc03026 0.79 -0.7 724,514 + SMc03026 0.79 +2.1 724,515 - SMc03026 0.79 -0.3 724,515 - SMc03026 0.79 -2.2 724,515 - SMc03026 0.79 +0.4 724,515 - SMc03026 0.79 -1.5 724,515 - SMc03026 0.79 +1.0 724,515 - SMc03026 0.79 -1.2 724,516 + SMc03026 0.79 +0.3 724,517 - SMc03026 0.79 -0.4 724,517 - SMc03026 0.79 -0.4 724,526 - SMc03026 0.81 +0.8 724,828 - +0.7 724,863 + -0.3 724,863 + +1.0 724,864 - +0.6 724,864 - +0.3 724,909 - -0.4 725,202 - SMc03027 0.69 -5.1 725,202 - SMc03027 0.69 -3.5 725,253 + SMc03027 0.83 -0.1 725,316 + +1.0 725,317 - +0.6 725,317 - -0.8 725,349 - -1.2 725,621 + SMc03028 0.70 -3.3 725,665 - SMc03028 0.81 +0.1 725,742 + +0.4 725,742 + +1.2 725,767 - -0.0 725,767 - -0.2 725,767 - -1.2 726,051 - -0.2
Or see this region's nucleotide sequence