Strain Fitness in Sinorhizobium meliloti 1021 around SMc02860
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
213,470 | - | SMc02859 | 0.22 | -1.2 | |
213,470 | - | SMc02859 | 0.22 | -2.7 | |
213,633 | + | SMc02859 | 0.40 | +0.4 | |
213,805 | + | SMc02859 | 0.60 | -3.8 | |
213,971 | + | SMc02859 | 0.79 | +1.0 | |
214,066 | + | SMc02859 | 0.89 | -1.0 | |
214,384 | - | SMc02860 | 0.34 | -3.0 | |
214,384 | - | SMc02860 | 0.34 | -2.4 | |
214,616 | - | SMc02860 | 0.71 | -0.4 | |
214,742 | + | +0.3 | |||
214,742 | + | +1.7 | |||
214,743 | - | -1.9 | |||
214,816 | + | -0.5 | |||
214,817 | - | +1.3 | |||
214,867 | + | -0.9 | |||
214,867 | + | +0.3 | |||
214,868 | - | -0.3 | |||
214,868 | - | -0.1 | |||
214,869 | + | +0.3 | |||
214,870 | - | +0.5 | |||
214,940 | - | -2.8 | |||
215,270 | - | SMc02861 | 0.35 | +1.2 | |
215,363 | - | SMc02861 | 0.45 | -0.7 | |
215,783 | - | SMc02861 | 0.86 | -2.5 | |
215,783 | - | SMc02861 | 0.86 | -2.4 |
Or see this region's nucleotide sequence