Strain Fitness in Sinorhizobium meliloti 1021 around SMc02719
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,566,269 | + | SMc02717 | 0.76 | -4.1 | |
2,566,269 | + | SMc02717 | 0.76 | +0.6 | |
2,566,270 | - | SMc02717 | 0.76 | -0.4 | |
2,566,299 | - | SMc02717 | 0.78 | -1.4 | |
2,566,558 | + | -0.7 | |||
2,566,559 | - | +2.5 | |||
2,566,559 | - | +0.7 | |||
2,566,626 | + | +1.0 | |||
2,566,627 | - | -3.0 | |||
2,566,709 | + | +0.1 | |||
2,566,866 | + | SMc02718 | 0.61 | -1.2 | |
2,566,866 | + | SMc02718 | 0.61 | -1.2 | |
2,566,978 | + | +0.4 | |||
2,566,979 | - | -0.2 | |||
2,566,980 | + | +0.7 | |||
2,566,981 | - | -0.7 | |||
2,567,037 | + | +0.0 | |||
2,567,038 | - | +1.2 | |||
2,567,038 | - | -3.3 | |||
2,568,094 | - | SMc02719 | 0.82 | -1.4 | |
2,568,479 | - | -1.0 | |||
2,568,521 | - | -0.3 | |||
2,568,521 | - | +2.1 | |||
2,568,521 | - | -3.4 | |||
2,568,550 | + | SMc02720 | 0.12 | +0.2 | |
2,568,757 | + | SMc02720 | 0.48 | +0.9 | |
2,568,757 | + | SMc02720 | 0.48 | -0.3 | |
2,568,758 | - | +3.1 | |||
2,568,758 | - | SMc02720 | 0.48 | -2.7 | |
2,569,101 | - | +0.1 | |||
2,569,101 | - | +1.5 | |||
2,569,151 | + | +1.3 | |||
2,569,151 | + | -1.1 | |||
2,569,152 | - | -4.3 |
Or see this region's nucleotide sequence