Strain Fitness in Sinorhizobium meliloti 1021 around SMc02552
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,207,662 | - | -0.6 | |||
1,207,662 | - | -0.1 | |||
1,207,665 | - | +2.0 | |||
1,207,665 | - | -0.6 | |||
1,207,665 | - | -0.3 | |||
1,207,665 | - | -3.3 | |||
1,207,665 | - | +0.3 | |||
1,207,992 | + | SMc02553 | 0.44 | +0.8 | |
1,207,993 | - | SMc02553 | 0.44 | -0.5 | |
1,207,993 | - | SMc02553 | 0.44 | -0.1 | |
1,208,164 | + | SMc02553 | 0.65 | -0.2 | |
1,208,309 | + | SMc02553 | 0.82 | +0.0 | |
1,208,391 | + | +0.3 | |||
1,208,391 | + | +0.3 | |||
1,208,646 | + | +1.7 | |||
1,208,646 | + | +0.9 | |||
1,208,647 | - | -0.6 | |||
1,208,832 | + | +0.3 | |||
1,208,833 | - | +0.8 | |||
1,208,900 | - | -0.4 | |||
1,209,067 | + | +0.1 | |||
1,209,076 | + | +1.5 | |||
1,209,132 | + | -0.6 | |||
1,209,132 | + | -0.5 | |||
1,209,132 | + | +2.9 | |||
1,209,171 | + | -0.4 | |||
1,209,171 | + | -2.6 | |||
1,209,171 | + | +1.2 | |||
1,209,171 | + | -0.4 | |||
1,209,173 | + | +0.8 | |||
1,209,173 | + | +0.2 |
Or see this region's nucleotide sequence