Strain Fitness in Sinorhizobium meliloti 1021 around SMc02547

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
1,211,322	+		SMc02549	0.38	+0.7
1,211,340	-		SMc02549	0.42	+0.9
1,211,344	+		SMc02549	0.43	+1.2
1,211,385	+		SMc02549	0.51	-2.9
1,211,385	+		SMc02549	0.51	-1.9
1,211,385	+		SMc02549	0.51	-1.4
1,211,385	+		SMc02549	0.51	+2.3
1,211,385	+		SMc02549	0.51	+0.3
1,211,467	-		SMc02549	0.68	+1.0
1,211,467	-		SMc02549	0.68	-1.0
1,211,533	-		SMc02549	0.82	+0.0
1,211,695	+		SMc02548	0.16	-0.8
1,211,695	+		SMc02548	0.16	-0.7
1,211,695	+		SMc02548	0.16	+0.4
1,211,695	+		SMc02548	0.16	-1.3
1,211,696	-		SMc02548	0.16	-1.2
1,211,696	-		SMc02548	0.16	+1.8
1,211,735	+		SMc02548	0.24	+0.6
1,211,736	-		SMc02548	0.24	-3.1
1,211,801	+		SMc02548	0.37	+0.5
1,211,861	+		SMc02548	0.49	-1.1
1,211,861	+		SMc02548	0.49	+0.2
1,211,936	+		SMc02548	0.64	+0.7
1,212,042	+		SMc02548	0.85	-1.0
1,212,042	+		SMc02548	0.85	+0.0
1,212,042	+		SMc02548	0.85	-0.2
1,212,043	-		SMc02548	0.85	-1.1
1,212,108	+				-1.8
1,212,129	+				-1.3
1,212,130	-				+1.0
1,212,154	+				+0.2
1,212,155	-				-0.1
1,212,155	-				-1.6
1,212,196	+				-0.3
1,212,197	-				-0.4
1,212,490	+		SMc02547	0.39	+0.6
1,212,490	+		SMc02547	0.39	-0.9
1,212,530	-		SMc02547	0.43	-0.0
1,212,530	-		SMc02547	0.43	-0.3
1,212,530	-		SMc02547	0.43	+1.0
1,212,530	-		SMc02547	0.43	+1.3
1,212,530	-		SMc02547	0.43	-1.3
1,212,560	-		SMc02547	0.47	-1.2
1,212,562	+		SMc02547	0.47	-0.3
1,212,563	-		SMc02547	0.47	+0.4
1,212,563	-		SMc02547	0.47	-0.2
1,212,656	-		SMc02547	0.56	-1.7
1,212,766	-		SMc02547	0.68	-1.3
1,212,766	-		SMc02547	0.68	-0.4
1,213,006	+				-1.7
1,213,073	-				-1.8
1,213,111	+				-1.8
1,213,111	+				-0.4
1,213,112	-				+0.8
1,213,147	+				+1.8
1,213,148	-				-2.8
1,213,148	-				+0.6
1,213,148	-				-3.0
1,213,255	+				-2.1
1,213,256	-				+0.6
1,213,256	-				-1.6
1,213,294	-		SMc02546	0.10	+0.8
1,213,450	+		SMc02546	0.20	+0.2
1,213,451	-		SMc02546	0.20	-0.9
1,213,476	+		SMc02546	0.21	+0.3
1,213,477	-		SMc02546	0.22	-1.0
1,213,501	-		SMc02546	0.23	+0.6
1,213,577	-		SMc02546	0.28	+4.0
1,213,595	-		SMc02546	0.29	-1.1
1,213,752	+		SMc02546	0.39	+0.9
1,213,752	+		SMc02546	0.39	+0.2
1,213,753	-		SMc02546	0.39	-0.7
1,213,901	-		SMc02546	0.48	-0.7
1,214,011	+		SMc02546	0.55	-0.2
1,214,012	-		SMc02546	0.55	+0.7
1,214,012	-		SMc02546	0.55	-0.3