Strain Fitness in Sinorhizobium meliloti 1021 around SMc02510
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,282,426 | - | -1.0 | |||
3,282,426 | - | +0.7 | |||
3,282,536 | + | -1.0 | |||
3,282,537 | - | -1.4 | |||
3,282,965 | + | SMc02511 | 0.55 | -0.5 | |
3,282,982 | - | SMc02511 | 0.57 | +2.2 | |
3,283,169 | + | SMc02511 | 0.77 | +0.4 | |
3,283,170 | - | SMc02511 | 0.78 | -1.7 | |
3,283,220 | + | SMc02511 | 0.83 | +0.3 | |
3,283,220 | + | SMc02511 | 0.83 | -0.6 | |
3,283,221 | - | SMc02511 | 0.83 | -0.7 | |
3,283,221 | - | SMc02511 | 0.83 | -1.8 | |
3,283,221 | - | SMc02511 | 0.83 | -0.5 | |
3,283,221 | - | SMc02511 | 0.83 | -2.2 | |
3,283,221 | - | SMc02511 | 0.83 | -3.0 | |
3,283,221 | - | SMc02511 | 0.83 | -0.3 | |
3,283,258 | - | SMc02511 | 0.87 | +0.1 | |
3,283,258 | - | SMc02511 | 0.87 | -1.8 | |
3,283,339 | + | -0.4 | |||
3,283,340 | - | -0.1 | |||
3,283,402 | - | -2.9 | |||
3,283,624 | - | SMc02510 | 0.57 | -2.7 | |
3,283,904 | + | -0.3 | |||
3,283,904 | + | -0.6 | |||
3,283,904 | + | +0.5 |
Or see this region's nucleotide sequence