Strain Fitness in Sinorhizobium meliloti 1021 around SMc02362
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,108,309 | + | SMc02361 | 0.43 | -3.1 | |
1,108,310 | - | SMc02361 | 0.43 | -2.6 | |
1,108,349 | - | SMc02361 | 0.46 | -1.7 | |
1,108,400 | - | SMc02361 | 0.51 | +0.1 | |
1,108,438 | - | SMc02361 | 0.54 | -2.5 | |
1,108,438 | - | SMc02361 | 0.54 | -1.4 | |
1,108,692 | + | SMc02361 | 0.76 | +0.9 | |
1,108,693 | - | SMc02361 | 0.76 | -3.3 | |
1,108,822 | + | SMc02361 | 0.87 | -0.5 | |
1,108,822 | + | SMc02361 | 0.87 | -3.5 | |
1,108,822 | + | SMc02361 | 0.87 | +1.8 | |
1,109,070 | + | SMc02362 | 0.24 | -1.4 | |
1,109,220 | + | SMc02362 | 0.57 | -3.5 | |
1,109,340 | + | SMc02362 | 0.83 | -3.5 | |
1,109,340 | + | SMc02362 | 0.83 | -2.3 |
Or see this region's nucleotide sequence