Strain Fitness in Sinorhizobium meliloti 1021 around SMc01955

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
2,675,784	-		SMc01954	0.28	+1.2
2,675,784	-		SMc01954	0.28	-0.4
2,675,848	+		SMc01954	0.37	+0.0
2,675,849	-		SMc01954	0.37	+1.4
2,675,849	-		SMc01954	0.37	+1.1
2,675,942	-		SMc01954	0.50	-0.4
2,676,088	+		SMc01954	0.71	-3.3
2,676,088	+		SMc01954	0.71	-1.0
2,676,088	+		SMc01954	0.71	+0.1
2,676,088	+		SMc01954	0.71	-2.2
2,676,089	-		SMc01954	0.71	+0.2
2,676,089	-		SMc01954	0.71	-1.2
2,676,089	-		SMc01954	0.71	-2.9
2,676,089	-		SMc01954	0.71	+1.2
2,676,127	+		SMc01954	0.77	+0.5
2,676,150	+		SMc01954	0.80	+1.7
2,676,222	+				+0.0
2,676,346	+				-0.2
2,676,347	-				-1.0
2,676,395	+				+1.2
2,676,395	+				-1.6
2,676,395	+				-1.4
2,676,395	+				-0.6
2,676,396	-				+0.9
2,676,396	-				+0.1
2,676,396	-				-3.5
2,676,396	-				-1.2
2,676,396	-				-3.2
2,676,396	-				+0.4
2,676,480	+				-1.2
2,676,480	+				+0.0
2,676,480	+				-0.3
2,676,481	-				-2.4
2,676,554	+				-0.2
2,676,554	+				+0.0
2,676,555	-				-1.0
2,676,617	-				-0.2
2,676,642	+				+0.3
2,676,642	+				-2.5
2,676,739	-		SMc01955	0.12	-0.5
2,676,793	+		SMc01955	0.18	-1.5
2,676,794	-		SMc01955	0.18	-1.6
2,677,119	+		SMc01955	0.55	-4.3
2,677,120	-		SMc01955	0.56	+0.6
2,677,121	+		SMc01955	0.56	+1.1
2,677,335	+		SMc01955	0.80	+0.2
2,677,335	+		SMc01955	0.80	-0.3
2,677,335	+		SMc01955	0.80	-2.1
2,677,335	+		SMc01955	0.80	+1.1
2,677,336	-		SMc01955	0.80	-0.3
2,677,336	-		SMc01955	0.80	+0.7
2,677,336	-		SMc01955	0.80	+1.3
2,677,336	-		SMc01955	0.80	-2.6
2,677,336	-		SMc01955	0.80	-1.0
2,677,336	-		SMc01955	0.80	-1.9
2,677,336	-		SMc01955	0.80	-2.2
2,677,336	-		SMc01955	0.80	-0.3
2,677,336	-		SMc01955	0.80	+0.6
2,677,337	+		SMc01955	0.80	+0.1
2,677,549	-				-0.0
2,677,549	-				-0.4
2,677,568	+				-0.1
2,677,569	-				+1.2
2,677,644	-				-1.1
2,677,644	-				-0.2
2,677,960	-		SMc01956	0.29	+0.4
2,678,027	+		SMc01956	0.34	+1.2
2,678,247	-		SMc01956	0.48	+0.3
2,678,265	+		SMc01956	0.49	-0.6
2,678,265	+		SMc01956	0.49	-0.2
2,678,265	+		SMc01956	0.49	+0.4
2,678,265	+		SMc01956	0.49	+0.5
2,678,266	-		SMc01956	0.49	-3.5
2,678,299	+		SMc01956	0.51	-3.4
2,678,317	+		SMc01956	0.52	+0.4