Strain Fitness in Sinorhizobium meliloti 1021 around SMc01756
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,300,175 | + | SMc01755 | 0.46 | -0.8 | |
1,300,175 | + | SMc01755 | 0.46 | -0.2 | |
1,300,175 | + | SMc01755 | 0.46 | +0.8 | |
1,300,176 | - | SMc01755 | 0.46 | +1.0 | |
1,300,176 | - | SMc01755 | 0.46 | -2.3 | |
1,300,179 | + | SMc01755 | 0.46 | +0.8 | |
1,300,179 | + | SMc01755 | 0.46 | -0.0 | |
1,300,180 | - | SMc01755 | 0.46 | -2.1 | |
1,300,180 | - | SMc01755 | 0.46 | +0.1 | |
1,300,279 | + | SMc01755 | 0.54 | -0.3 | |
1,300,442 | + | SMc01755 | 0.68 | -2.6 | |
1,300,667 | + | SMc01755 | 0.86 | -0.4 | |
1,300,667 | + | SMc01755 | 0.86 | +0.1 | |
1,300,668 | - | SMc01755 | 0.86 | -0.2 | |
1,300,668 | - | SMc01755 | 0.86 | +0.0 | |
1,300,882 | + | +1.0 | |||
1,300,904 | - | +0.7 | |||
1,300,904 | - | -1.8 | |||
1,300,904 | - | -1.3 | |||
1,300,930 | - | -0.6 | |||
1,301,125 | + | +1.6 | |||
1,303,038 | - | +0.2 | |||
1,303,271 | + | SMc01757 | 0.42 | -0.1 | |
1,303,321 | + | SMc01757 | 0.55 | -1.1 | |
1,303,421 | - | SMc01757 | 0.81 | -4.1 | |
1,303,677 | - | -0.2 |
Or see this region's nucleotide sequence