Strain Fitness in Sinorhizobium meliloti 1021 around SMc01521

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
2,610,716	-				+0.6
2,610,744	+				-2.6
2,610,744	+				-1.9
2,610,745	-				+0.8
2,610,745	-				-1.2
2,611,024	-		SMc01522	0.50	-0.3
2,611,034	-		SMc01522	0.52	+0.7
2,611,381	+				-1.2
2,611,381	+				-2.9
2,611,381	+				+2.1
2,611,382	-				-0.3
2,611,407	+				-2.7
2,611,422	-				+0.5
2,611,469	+		SMc03949	0.11	-2.0
2,611,469	+		SMc03949	0.11	+0.7
2,611,469	+		SMc03949	0.11	+0.9
2,611,477	+		SMc03949	0.14	+0.2
2,611,514	+		SMc03949	0.27	+0.5
2,611,683	-		SMc03949	0.89	+1.3
2,611,685	-				+0.0
2,611,685	-				-0.5
2,611,719	-				+0.6
2,611,811	+		SMc01521	0.25	+1.1
2,611,811	+		SMc01521	0.25	+0.6
2,611,812	-		SMc01521	0.25	+2.3
2,611,812	-		SMc01521	0.25	+1.9
2,611,845	-		SMc01521	0.34	+0.4
2,612,024	+		SMc01521	0.78	-0.1
2,612,024	+		SMc01521	0.78	-1.4
2,612,025	-		SMc01521	0.78	-0.9
2,612,025	-		SMc01521	0.78	+1.1
2,612,056	+				+0.1
2,612,057	-		SMc01521	0.86	+1.1
2,612,057	-		SMc01521	0.86	-1.3
2,612,086	+				-0.6
2,612,086	+				+0.3
2,612,087	-				-1.4
2,612,112	-				-4.3
2,612,139	+				+1.3
2,612,139	+				-1.0
2,612,269	-				+1.3
2,612,320	-		SMc01520	0.20	-0.7
2,612,320	-		SMc01520	0.20	-0.5
2,612,320	-		SMc01520	0.20	+0.2
2,612,320	-		SMc01520	0.20	+0.3
2,612,403	+		SMc01520	0.41	-2.1
2,612,404	-		SMc01520	0.41	-0.6
2,612,404	-		SMc01520	0.41	-0.7
2,612,442	+		SMc01520	0.51	+0.6
2,612,442	+		SMc01520	0.51	-0.5
2,612,442	+		SMc01520	0.51	-0.1
2,612,442	+		SMc01520	0.51	+0.1
2,612,442	+		SMc01520	0.51	-0.2
2,612,443	-		SMc01520	0.51	+0.0
2,612,616	-				-4.3
2,612,631	+				-1.2
2,612,631	+				+0.3
2,612,632	-				-2.9
2,612,632	-				+2.5
2,612,632	-				+0.4
2,612,880	+		SMc01519	0.64	-0.8
2,612,881	+		SMc01519	0.65	-0.4
2,612,881	+		SMc01519	0.65	-0.4
2,612,882	-		SMc01519	0.65	-2.7
2,612,882	-		SMc01519	0.65	-3.3
2,613,024	-				+1.1
2,613,054	+				+1.0
2,613,103	+				-2.4
2,613,103	+				+0.7
2,613,103	+				+2.1
2,613,103	+				-0.8
2,613,103	+				-0.8
2,613,104	-				+1.0
2,613,104	-				-3.3