Strain Fitness in Sinorhizobium meliloti 1021 around SMc01191
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,739,154 | - | +0.7 | |||
1,739,154 | - | +0.3 | |||
1,739,154 | - | -1.6 | |||
1,739,154 | - | -0.0 | |||
1,739,163 | - | +0.3 | |||
1,739,184 | - | -0.9 | |||
1,739,299 | + | -0.1 | |||
1,739,300 | - | -0.0 | |||
1,739,300 | - | -1.3 | |||
1,739,437 | - | SMc01191 | 0.27 | -0.4 | |
1,739,437 | - | SMc01191 | 0.27 | +0.4 | |
1,739,438 | + | SMc01191 | 0.28 | -0.0 | |
1,739,438 | - | SMc01191 | 0.28 | +1.9 | |
1,739,439 | - | SMc01191 | 0.28 | +0.3 | |
1,739,564 | + | SMc01191 | 0.68 | +1.7 | |
1,739,564 | + | SMc01191 | 0.68 | -2.5 | |
1,739,565 | - | SMc01191 | 0.68 | +0.9 | |
1,739,623 | + | SMc01191 | 0.87 | +0.3 | |
1,739,662 | - | +1.3 | |||
1,739,678 | - | +0.2 | |||
1,739,703 | + | +1.2 | |||
1,739,703 | + | +0.6 | |||
1,739,756 | - | +1.6 | |||
1,739,758 | - | -0.4 |
Or see this region's nucleotide sequence