Strain Fitness in Sinorhizobium meliloti 1021 around SMc01171

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
1,757,596	-				+0.6
1,757,672	-				+1.3
1,757,785	+				-0.9
1,757,786	-				+0.4
1,757,839	-		SMc01172	0.16	-0.5
1,758,299	+		SMc01172	0.69	+2.3
1,758,300	-		SMc01172	0.69	-1.4
1,758,300	-		SMc01172	0.69	+1.0
1,758,331	+		SMc01172	0.73	+2.3
1,758,331	+		SMc01172	0.73	-0.7
1,758,332	-		SMc01172	0.73	+1.0
1,758,482	+				+1.5
1,758,483	-				-0.1
1,758,483	-				+1.3
1,758,483	-				-2.6
1,758,483	-				-2.1
1,758,492	-				+0.4
1,758,492	-				+0.4
1,758,492	-				+0.4
1,758,499	-				-0.1
1,758,554	+				-1.2
1,758,704	+		SMc01171	0.24	+0.6
1,758,705	-		SMc01171	0.24	+4.1
1,758,705	-		SMc01171	0.24	+0.5
1,758,705	-		SMc01171	0.24	+0.6
1,758,708	-		SMc01171	0.25	+1.5
1,758,719	+		SMc01171	0.27	-0.3
1,758,720	-		SMc01171	0.27	+0.5
1,758,720	-		SMc01171	0.27	-2.9
1,758,824	+		SMc01171	0.45	+0.7
1,758,825	-		SMc01171	0.45	+1.3
1,758,825	-		SMc01171	0.45	+0.7
1,758,825	-		SMc01171	0.45	+1.0
1,758,825	-		SMc01171	0.45	+0.0
1,759,037	+		SMc01171	0.83	-3.3
1,759,037	+		SMc01171	0.83	+1.0
1,759,038	-				+2.8
1,759,153	+				-0.3
1,759,153	+				+0.9
1,759,166	+				-1.6
1,759,166	+				+0.2
1,759,167	-				+0.8
1,759,246	+				+0.1
1,759,281	-		SMc01170	0.10	+1.9
1,759,304	-		SMc01170	0.15	+1.6
1,759,390	+		SMc01170	0.33	-0.2
1,759,391	-		SMc01170	0.34	-0.3
1,759,391	-		SMc01170	0.34	+0.2
1,759,391	-		SMc01170	0.34	-0.7
1,759,432	+		SMc01170	0.42	+0.9
1,759,433	-		SMc01170	0.43	-0.9
1,759,525	+		SMc01170	0.62	+1.6
1,759,526	-		SMc01170	0.62	-3.7
1,759,526	-		SMc01170	0.62	+0.3
1,759,541	-		SMc01170	0.66	+1.0
1,759,564	+		SMc01170	0.71	-0.0
1,759,667	-				-0.3
1,759,784	-				-0.4
1,759,975	+				-1.0
1,759,975	+		SMc01169	0.21	+0.4
1,759,975	+		SMc01169	0.21	-1.1
1,759,975	+		SMc01169	0.21	-1.4
1,759,975	+		SMc01169	0.21	-0.6
1,759,976	-		SMc01169	0.21	-0.4
1,759,999	+		SMc01169	0.23	+0.0
1,760,000	-		SMc01169	0.23	-2.0
1,760,000	-		SMc01169	0.23	-0.9
1,760,000	-		SMc01169	0.23	-0.1
1,760,000	-		SMc01169	0.23	+0.8
1,760,000	-		SMc01169	0.23	+0.4
1,760,000	-		SMc01169	0.23	+0.2
1,760,003	+		SMc01169	0.23	-0.9
1,760,003	+		SMc01169	0.23	+0.3
1,760,004	-		SMc01169	0.23	-2.0
1,760,004	-		SMc01169	0.23	+0.8