Strain Fitness in Sinorhizobium meliloti 1021 around SMc01160
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
390,526 | - | +0.3 | |||
390,651 | + | +0.3 | |||
390,762 | - | SMc01160 | 0.30 | +0.2 | |
390,878 | + | SMc01160 | 0.55 | +1.2 | |
391,121 | + | -0.7 | |||
391,121 | + | +0.1 | |||
391,482 | - | SMc01159 | 0.45 | -0.2 | |
391,493 | + | SMc01159 | 0.46 | +1.5 | |
391,494 | - | SMc01159 | 0.46 | -2.4 | |
391,823 | + | SMc01159 | 0.83 | +0.0 | |
391,824 | - | SMc01159 | 0.83 | +0.1 | |
391,824 | - | SMc01159 | 0.83 | -0.6 | |
391,868 | + | SMc01159 | 0.88 | +0.1 | |
391,869 | - | SMc01159 | 0.88 | -1.0 | |
391,869 | - | SMc01159 | 0.88 | -3.5 | |
391,869 | - | SMc01159 | 0.88 | -1.0 | |
391,869 | - | SMc01159 | 0.88 | -0.6 | |
391,952 | - | -0.1 | |||
391,952 | - | +0.2 | |||
391,952 | - | +0.2 |
Or see this region's nucleotide sequence