Strain Fitness in Sinorhizobium meliloti 1021 around SMc01155
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
396,128 | - | +2.8 | |||
396,130 | - | +0.9 | |||
396,130 | - | -0.6 | |||
396,130 | - | +3.5 | |||
396,130 | - | -1.5 | |||
396,130 | - | +0.5 | |||
396,130 | - | -2.7 | |||
396,130 | - | -0.4 | |||
396,187 | + | -1.4 | |||
396,188 | - | +0.8 | |||
396,385 | - | SMc01154 | 0.19 | -0.4 | |
396,588 | + | SMc01154 | 0.42 | +0.4 | |
396,588 | + | SMc01154 | 0.42 | +0.1 | |
396,588 | + | SMc01154 | 0.42 | +0.8 | |
396,589 | - | SMc01154 | 0.42 | +0.6 | |
396,589 | - | SMc01154 | 0.42 | +0.9 | |
396,788 | + | SMc01154 | 0.64 | -0.6 | |
396,788 | + | SMc01154 | 0.64 | -4.1 | |
396,789 | - | SMc01154 | 0.64 | -0.7 | |
396,792 | + | SMc01154 | 0.64 | -0.9 | |
397,009 | - | SMc01154 | 0.88 | +1.2 |
Or see this region's nucleotide sequence