Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00976 and SMc00975 are separated by 256 nucleotides SMc00975 and SMc00974 are separated by 81 nucleotides
SMc00976: SMc00976 - enoyl-CoA hydratase, at 962,585 to 963,337
SMc00976
SMc00975: SMc00975 - chemoreceptor methyl-accepting chemotaxis transmembrane protein, at 963,594 to 965,717
SMc00975
SMc00974: SMc00974 - RNA methyltransferase, at 965,799 to 967,046
SMc00974
Position (kb) 963
964
965
966 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 962.621 kb on + strand at 962.687 kb on + strand, within SMc00976 at 962.688 kb on - strand, within SMc00976 at 962.688 kb on - strand, within SMc00976 at 963.335 kb on + strand at 963.394 kb on + strand at 963.394 kb on + strand at 963.395 kb on - strand at 963.395 kb on - strand at 963.421 kb on - strand at 963.421 kb on - strand at 963.705 kb on + strand at 963.706 kb on - strand at 963.706 kb on - strand at 963.707 kb on + strand at 963.922 kb on - strand, within SMc00975 at 964.005 kb on + strand, within SMc00975 at 964.051 kb on - strand, within SMc00975 at 964.389 kb on + strand, within SMc00975 at 964.389 kb on + strand, within SMc00975 at 964.587 kb on - strand, within SMc00975 at 964.587 kb on - strand, within SMc00975 at 965.479 kb on + strand, within SMc00975 at 965.480 kb on - strand, within SMc00975 at 965.480 kb on - strand, within SMc00975 at 965.480 kb on - strand, within SMc00975 at 965.579 kb on + strand at 965.579 kb on + strand at 965.660 kb on - strand at 965.660 kb on - strand at 965.685 kb on + strand at 965.762 kb on + strand at 965.768 kb on + strand at 965.768 kb on + strand at 965.769 kb on - strand at 966.503 kb on + strand, within SMc00974
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 962,621 + -3.9 962,687 + SMc00976 0.14 +1.3 962,688 - SMc00976 0.14 +2.7 962,688 - SMc00976 0.14 -0.1 963,335 + -0.6 963,394 + +1.1 963,394 + -4.6 963,395 - -0.7 963,395 - +0.7 963,421 - +0.9 963,421 - +1.2 963,705 + +0.1 963,706 - +0.1 963,706 - -0.5 963,707 + +1.1 963,922 - SMc00975 0.15 +1.1 964,005 + SMc00975 0.19 +0.5 964,051 - SMc00975 0.22 -3.0 964,389 + SMc00975 0.37 +1.0 964,389 + SMc00975 0.37 +0.3 964,587 - SMc00975 0.47 +1.9 964,587 - SMc00975 0.47 +0.4 965,479 + SMc00975 0.89 +0.4 965,480 - SMc00975 0.89 -0.3 965,480 - SMc00975 0.89 +0.4 965,480 - SMc00975 0.89 -4.0 965,579 + -0.7 965,579 + -2.8 965,660 - +0.3 965,660 - +0.3 965,685 + -2.2 965,762 + +0.5 965,768 + +1.3 965,768 + -0.6 965,769 - -2.4 966,503 + SMc00974 0.56 -0.6
Or see this region's nucleotide sequence