Strain Fitness in Sinorhizobium meliloti 1021 around SMc00669

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
2,909,871	+				-0.1
2,909,871	+				-0.5
2,909,872	-				-4.3
2,909,872	-				+0.9
2,910,130	+		SMc00670	0.32	+2.3
2,910,131	-		SMc00670	0.33	+0.2
2,910,307	+		SMc00670	0.54	+0.7
2,910,307	+		SMc00670	0.54	+1.4
2,910,307	+		SMc00670	0.54	-0.7
2,910,308	-		SMc00670	0.54	+0.5
2,910,636	-				-2.4
2,910,636	-				+1.1
2,910,636	-				-0.1
2,910,636	-				-0.6
2,910,713	+				-1.4
2,910,713	+				+0.5
2,910,837	+		SMc00669	0.10	-0.3
2,910,991	+		SMc00669	0.21	+0.4
2,910,991	+		SMc00669	0.21	-1.5
2,910,991	+		SMc00669	0.21	-0.5
2,910,992	-		SMc00669	0.21	+0.4
2,911,108	+		SMc00669	0.28	-0.4
2,911,109	-		SMc00669	0.29	-0.4
2,911,109	-		SMc00669	0.29	-1.2
2,911,234	-		SMc00669	0.37	+0.7
2,911,347	+		SMc00669	0.44	-0.2
2,911,347	+		SMc00669	0.44	+2.0
2,911,475	+		SMc00669	0.53	+1.1
2,911,476	-		SMc00669	0.53	+0.3
2,911,793	+		SMc00669	0.74	+0.5
2,911,793	+		SMc00669	0.74	+0.5
2,911,794	-		SMc00669	0.74	+1.8
2,911,827	+		SMc00669	0.76	+1.6
2,912,016	+		SMc00669	0.89	+0.9
2,912,017	-		SMc00669	0.89	+0.4
2,912,068	-				-3.0
2,912,077	+				-1.2
2,912,078	-				-0.3
2,912,178	+				-1.5
2,912,179	-				+1.4
2,912,209	+				+0.3
2,912,210	-				-0.6
2,912,210	-				-0.9
2,912,210	-				+1.0
2,912,291	+				-0.2
2,912,291	+				+0.9
2,912,292	-				+0.1
2,912,292	-				-0.5
2,912,400	-		SMc00668	0.14	+0.1
2,912,417	-		SMc00668	0.15	+0.5
2,912,518	+		SMc00668	0.23	-0.4
2,912,609	+		SMc00668	0.30	+2.2
2,912,707	-		SMc00668	0.37	-0.1
2,912,755	+		SMc00668	0.41	-0.2
2,912,755	+		SMc00668	0.41	-1.7
2,912,803	+		SMc00668	0.45	-0.3
2,912,899	-		SMc00668	0.52	-1.8