Strain Fitness in Sinorhizobium meliloti 1021 around SMc00494

Experiment: copper (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 1 mM
1,915,598	-				+0.8
1,915,598	-				+0.3
1,915,621	+				+1.1
1,915,621	+				+0.1
1,915,622	-				+0.5
1,915,679	+				-0.3
1,915,679	+				-2.0
1,915,684	+				+0.4
1,915,684	+				-2.9
1,915,684	+				+0.3
1,915,685	-				+3.3
1,915,685	-				+2.5
1,915,690	-				+1.2
1,915,720	+				+0.7
1,915,720	+				+0.1
1,915,720	+				+1.1
1,915,720	+				+0.4
1,915,822	+				-0.4
1,915,822	+				+1.8
1,915,822	+				+1.7
1,915,826	+				+1.3
1,915,826	+				+1.5
1,916,165	+		SMc00495	0.47	+2.0
1,916,168	+		SMc00495	0.47	+1.4
1,916,354	+		SMc00495	0.72	+2.2
1,916,355	-		SMc00495	0.72	-2.0
1,916,567	+				+2.4
1,916,568	-				+0.5
1,916,605	-				+0.1
1,916,794	+		SMc00494	0.85	+1.0
1,916,810	+				+1.8
1,916,810	+				-0.8
1,916,811	-				+0.9
1,916,811	-				+1.5
1,916,878	+				-0.0
1,916,879	-				-1.5
1,916,879	-				-2.3
1,916,879	-				+0.3
1,916,880	+				-1.5
1,916,880	+				+0.4
1,916,881	-				+0.4
1,916,881	-				+0.4
1,916,881	-				+0.6
1,916,902	+				+0.6
1,916,902	+				-1.3
1,916,903	-				-2.2
1,916,903	-				+1.3
1,916,903	-				-0.8
1,916,903	-				+0.8
1,916,903	-				-1.4
1,916,903	-				-0.8
1,916,903	-				-2.2
1,916,906	+				+2.4
1,916,907	-				+0.2
1,916,907	-				-2.5
1,916,907	-				-0.1
1,917,069	-		SMc00493	0.23	-1.0
1,917,078	-		SMc00493	0.25	+0.3
1,917,078	-		SMc00493	0.25	+2.8
1,917,299	+		SMc00493	0.58	+0.3
1,917,350	+		SMc00493	0.65	+0.5
1,917,350	+		SMc00493	0.65	+0.2
1,917,350	+		SMc00493	0.65	-2.0
1,917,350	+		SMc00493	0.65	-2.0
1,917,350	+		SMc00493	0.65	-1.0
1,917,411	-		SMc00493	0.74	+0.3
1,917,570	+				-0.8
1,917,571	-				+1.2
1,917,571	-				+0.1
1,917,571	-				-3.0
1,917,571	-				+0.0
1,917,595	+				-0.2
1,917,595	+				+1.5
1,917,688	+				-0.0
1,917,688	+				+0.2
1,917,688	+				+1.0
1,917,688	+				+0.3
1,917,689	-				-0.3
1,917,689	-				+0.6
1,917,689	-				-3.3