Strain Fitness in Sinorhizobium meliloti 1021 around SMc00470
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
1,954,724 | - | +0.3 | |||
1,954,724 | - | -0.4 | |||
1,954,724 | - | -3.3 | |||
1,954,724 | - | -0.7 | |||
1,954,724 | - | -1.0 | |||
1,954,724 | - | +0.1 | |||
1,954,779 | - | +0.2 | |||
1,954,905 | - | -1.8 | |||
1,954,905 | - | +0.8 | |||
1,955,030 | + | +1.2 | |||
1,955,596 | + | SMc00470 | 0.58 | -1.4 | |
1,955,718 | - | SMc00470 | 0.71 | -3.0 | |
1,955,718 | - | SMc00470 | 0.71 | -3.8 | |
1,955,973 | - | -1.3 | |||
1,955,994 | + | -2.3 | |||
1,956,002 | - | -0.2 | |||
1,956,002 | - | -3.7 | |||
1,956,066 | + | -0.1 | |||
1,956,554 | - | -0.2 | |||
1,956,554 | - | -0.7 | |||
1,956,634 | - | -0.6 | |||
1,956,913 | + | +0.4 | |||
1,956,913 | + | +0.8 | |||
1,956,913 | + | -2.1 | |||
1,956,914 | - | -0.8 | |||
1,956,914 | - | -1.4 | |||
1,956,914 | - | +0.2 | |||
1,956,914 | - | +1.3 | |||
1,956,914 | - | +0.4 | |||
1,956,914 | - | +0.3 |
Or see this region's nucleotide sequence