Strain Fitness in Sinorhizobium meliloti 1021 around SMc00341
Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
297,367 | + | SMc00340 | 0.73 | +1.2 | |
297,367 | + | SMc00340 | 0.73 | -0.4 | |
297,367 | + | SMc00340 | 0.73 | -0.8 | |
297,469 | + | SMc00340 | 0.82 | +0.2 | |
297,470 | - | SMc00340 | 0.82 | +0.4 | |
297,827 | + | SMc00341 | 0.27 | -0.9 | |
297,827 | + | SMc00341 | 0.27 | -4.7 | |
297,839 | + | SMc00341 | 0.30 | -0.4 | |
297,875 | + | SMc00341 | 0.41 | +2.5 | |
297,876 | - | SMc00341 | 0.42 | -1.0 | |
297,913 | - | SMc00341 | 0.53 | -2.0 | |
298,022 | - | SMc00341 | 0.86 | -1.6 | |
298,068 | + | -0.3 | |||
298,068 | + | -0.9 | |||
298,068 | + | +1.4 | |||
298,068 | + | -4.6 | |||
298,069 | - | -4.4 | |||
298,070 | + | -1.7 | |||
298,070 | + | -0.4 | |||
298,070 | + | -1.0 | |||
298,071 | - | -4.0 | |||
298,071 | - | +1.1 | |||
298,144 | + | -3.7 | |||
298,146 | + | -2.5 | |||
298,146 | + | +0.1 | |||
298,155 | + | +0.5 | |||
298,155 | + | -3.0 | |||
298,156 | - | +2.4 | |||
298,256 | + | +0.5 |
Or see this region's nucleotide sequence